Gene Information

Name : Dd1591_2023 (Dd1591_2023)
Accession : YP_003004348.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : DspFAvrF family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2319968 - 2320390 bp
Length : 423 bp
Strand : +
Note : PFAM: DspFAvrF family protein; Tir chaperone family protein; KEGG: eca:ECA2114 putative avirulence protein

DNA sequence :
ATGACATCAGCACAACAACAGGCGGCACGCTTGCTGCAACATTTCAGCCAGTTCAACAAAACCCGCCTGACGCTGAATAA
CGGCATCTGTGTCCTGAACGGCGCCGACGGGCGAGAGGCGGCGGTGATTGAAGTGCCGGCGCAGAGCGACAATCTGCTGC
TGCACTGCCAGGTGGTCAACCTGAAAGGAGAAAACCGTGCTGCTATCTATCGGCTGATGCTGCTGCTTAATTTCGAGATG
GCGGCGATGCGCGGGTGCTGGCTGGCGCTGGATGAGTTCGACAATCTGCGCCTGTGCAGCCAGTATCCGCTGGATAAGCT
GGATGAACCGGGTTTTAACGCACTGCTCAATGGTTATATTCGGCAGGTAGCGGAAACACGGTCATTTATCGAGCAGACGC
TGGCGCAAGCCAACGCCGCCTGA

Protein sequence :
MTSAQQQAARLLQHFSQFNKTRLTLNNGICVLNGADGREAAVIEVPAQSDNLLLHCQVVNLKGENRAAIYRLMLLLNFEM
AAMRGCWLALDEFDNLRLCSQYPLDKLDEPGFNALLNGYIRQVAETRSFIEQTLAQANAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dspF AAC04851.1 DspF Virulence Hrp PAI Protein 3e-32 50
avrF ABA47300.1 AvrF Not tested S-PAI Protein 3e-23 44
avrF AAT96271.1 AvrF Not tested S-PAI Protein 6e-20 42
avrF AAT96312.1 AvrF Not tested S-PAI Protein 6e-20 42
avrF AAT96351.1 AvrF Not tested S-PAI Protein 5e-20 42