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Name : Dd1591_0420 (Dd1591_0420) Accession : YP_003002787.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Unknown Product : YD repeat protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 483390 - 487817 bp Length : 4428 bp Strand : + Note : TIGRFAM: YD repeat protein; PFAM: YD repeat-containing protein; PAAR repeat-containing protein; KEGG: eca:ECA4278 rhs-family protein DNA sequence : ATGCTCAACGATATTCTGAGCCGGGTGGCCCGGGTAGGGGCCATGCATGCCGGAAACCGTCCCAACCCGCCCGCCGACCG GCCGCAACCCTGTCAGGGTAAACCGCCAACGTCGCCGGGCAAGACCATCAAGCACAAGAGCTTCCTGGGTGCACTGGCGG GTGCCGTGGCCGGGGCGCTGGTGGCGGCCGCCGTATTTACCGCCGCTGCGGCCGTGGCGGGTGCTATCGCCGTTGCGGCG ATTGGCACGGGTGGAATGGGGGCGGCGCTGGTGGTGGGGGTGGTAAAACTGGCCGCCGGATTTGGTGCGGTCAGCCTGCT GGGTGGGCTGATAGACGCGGTGTCCAGCAAGGTGTCGGCGATGGTGGACAGCGGCTCGCCATCGTTCGGACCGGTGATGG CGGGCTCGGGTAACGTGTTTGTCGAAAAACAGCCGGTGGCCCGCGCCACGAAAGATACCGTCGCCTGCACCCGGCACAAC AGCCCGCAACTGATTGCCCAGGGCAGCGAGTCGGTATTTGTGAACGACGCGCCAGCGGCCCGTATCGACGATAAAACCGT GTGTGGTGCCACTATCAAGGAAGGGGCCTCGACGGTATTTTTCGGCTCCGGGCAGGGCACCTATCTGGAGATTGCCGAAG AGTTTACCGCGCTGCAACGCGCGCTGCTGATTGCGGTGGAGTTTCTGGTGCCGCCCAGCCGCGGCATGTTCAGGGGGCTG GGGAAACTGTTCACCCGTGGGCCGATGGCGGTACTAAAAGGGATGCGCGCCGGGGCGCTGAAAACGCTGGAAGGACTGAA AAGCGCCGTTAAATGTGCCAGTGAGGGGTTTCGCAACAGCAGGGGACTGTCGCGTGTCACGGAAGCGGTGCGCGGTTTCC TCAAAGACCCGGTTTATATCGCCAGCGGCGAGGTGATTGAATCCCGTACCGATATCGCGCTGGGCCAGACGCTGCCGCTG GTGTTCGAACGCACCTACCGCTCTGCCTCGGTACACACCGGGCTGCTGGGCCGCGGCTGGCACGACAGTTGGAGCGAGGT GGCGACGGTAACGCGCGACGGCCTCAACACCCACGTGGTCATCACGCTGGCACAGGGCTACGACATCGATTTTACCTTCC ATCAGGACGTACAGGCGGTGTACTGCCCACACTACCCTGAATTTACCCTGCACCGCCGGGGCGACGGCTTCAGCCTGTGG CACCGCGACCAGCAGACCTGGCGCGACTTTAGCGTGGTGCAGGGCGAGCGCCGGTTGCTGTCGGCCATTCACGATAGCCA CGACAACCGCATTGAACTGGTGCGCGACCCGAAAGGCTACCTGCGCCAGGTGCGCCACAGCGACGGCGTCACCCTGCTGC TGGTGTGGCGGGGCGAGTACCTGCACCAGATACAACGCATCGACGGCGGCCAGAAGACGTTGCTGGCCGAGTACCGCCAG GACGAACAGGGCCGACTGGTGGAAGCCAACGCCACCCACGCCTATCACCTCTACTACGAGTACGACGCCGCCCATCGGCT GACCCGCTGGCACGATAACGACCAGACCTGGGCGCGCTACGAATACGATACGCAGGGGCGCTGCGTCTACACCACCTGCG CCGACGGGTTTCTGACCGCCCGCTTCGACTACCTGCCCGACCGGGTGGTGATGACCGACGGCCTCGGCCAGCGCAGCGAA TTCGGCTTTAACGACCTGCACCTGATGAGCTGGGAACAATCCCCGCTCGGTCACGTCACCCGCTACGAGTACGACGAGGT CGGCAACCTGCTGCGGGAAATCTCGCCCGCCGGGCGGGTGGTCGAATTCGGCTATCTGGACGACACCGGGCGGGTCAGCA CCTTTACCGACGCCAGCGGGCATCAGTGGCGGTACGACTACGACGACGCGCTGCGGCTGTGCGGCGTCACCGACCCGCTG GGACGCGAGTGGCGCTGGGTGTATGACGCCGAGGGTAACCCGGAACGGCTCACCGGCCCGGAAGCCAGCGAGGTACGATT CGCCTGGAACCGCTACGGCCTGCTGACCCAGGTCAGCGACGCCGCCGGTGAGGTGCAGGCGCGGTTGCAGTACGACCACC GCCAGCGGCTGCTGAGCGCCACCGATGCCGAGAGCCGCACCCAGCAAATGCGTTACGACATGCAGGACCGGGTGGTACAG TGGCAACGGGCGGATGGTGCCCGTTTCCGGCTCGGCTACCGCCGGGCCAGCTGGGCACTGCCGGAGCAACTGATACGCCC GGATGACAAGGAAGAGCAGCGCCAGTACGACCGCCACAACAACCTGCTGAGCTACGTGGACGGCAACGGCGCGCTGTGGC GTCAGAGCTTCGGCCCGTTCGACCTGCTGACCGCCCGCACCGACGCCGAAGGCCACACCTGGCGCTACGCGTACGATAAA GAGAGCCAGCAACTGACAACGGTTATTGCCCCGGACGGCAGCCGCTGGCAGTGGTGGCTGGACGCCGACGGGCGGGTCGT CCGCGAGCGTGACATGACCGGCACCGAGACCCACTACGGCTACGACGAGGACGGCCTGTGCGTCAGCGTGCGCAACGGCG AAGGCGACACCCGCCACTTCCTCTACGACGCCCGCGGGCTGCTGTTGCGTGAAACCGCGCCGGACGACACCCTGCACTAC CGGTACGATGCGGTGGGCCGCCTGACCGAGGTCTCGTCGGCCACCGCCCATGTGCAGCTGGACTACGACCTGCGCGACCG GGTGGTGCGCGAATGGCACAACGGCACGCTGCTTACCCGGCAGGTTGATGACAACGCCCGCACCGTCACCCGCACCCTGA CCTGGGACGGCGACGCCGGGGACACCACCGGCACCCTCGCGCCGCTCACCAGTCTGTTCCATTACACCCGCACCGGCGAG CTGCGGCAGGTGCAGTTGCCGGACGGTGCCGACCTGACCCTGACCTATGACGCGGCGGGCCGCGAGTCACACCGCCGCGG CGGCAGCGGCTTTGTCCAGCAGCGGGAATACGACGTGATGGGCTGGCTGACGCGGGAGATGAGCGGGGCACAGCACGACG GCCACCTGCTGGCGGCACAGACGCGGGAATACCGCTACGACGGTGCCGGTAACCTGACCGGGGTGCGTCACAACCGCGAC GCCGAAGGTTATCGTCTGGACGCCACCGGCCGGGTGCAGGCAGTGCTGAGCGGCGGTGCGGGCAAACCGGTGGACACCAC CGCCCGCTTCCACTACACCCGCACCGGTCTGCCGCAGGAGGCAGGGCGGCTTACCGAGTGGCAGGCGGGCAGACTGGTTC AGCACGATGACACCCATTACCAGTACGACAGGGCCGGACGGCTTATCCGTAAACAGGTGGTGCAGCCGGGCTACCGCCCG CAGGTGTGGCAGTACCGCTGGGACAGCCGCAACCAGCTGCGGGTGGTGGATACCCCGACCGGCGAACGCTGGCTGTACCG TTACGACCCGTTCGGTCGCCGGGTGGGCAAACGCTGCGACCAGAAAGCCGAAGAGACCCGCTACCAGTGGGACGGCGACC AGATAGCGGAAATCCGCCACTACCGCCACGGCCAGCTCGTGGCCCGCCGTCACTGGGTCTACAACGGCTGGGAGCTGGTG GTACAGCAGCGCCAGCACACCGGCGGCGACTGGGAAACGGATTTTGTGACCAGCAGCCAGAACGGTACTCCACAGGCGCT GTTCACACCGGACGGCACCCTGCGCTGGCAGGCCCCGACAGCCACCCTGTGGGGCCAGCGTCAGGCAGAAAAATCGGAAA GTCCGGACCCCGGCCTGGCCTTCGCCGGGCAGCTCCGTGACAGCGAAAGCGGGCTATGCTATAACCGCTTTCGGTACTAC GACCCGGCCGGTGGGTGTTATGTCTCGCCAGACCCGATAGGGATAGCGGGGGGTGAGAATAACTATGGCTACGTCCAGAA TCCCATGTGCTGGGTTGATCCGTTTGGGTTGGCTGGATGTAGTTCATACCTTAATGCTTGGGGAGGGAGAAATGCCAAAG CATTTAAGAATTTTTGGAATAACTCAAGTCATGCTGATTTCATGAAAGCTTGGAATAATCCTGCTTTCAAAAAAAATATC AAAGCTAGACTACGAGGTGGCGGTTTAACTAACAGTGGTGGGTATCATGAATGGCTTCCTGTTTCACAGGGAGATAAATT TAAAAAAATGGGATTCTCTTTTGAGGAGTATATGTCTTTGACCTCACCAACCAATAAAGTTGGATTCTTAGACAAATTTG GGAATTACGGTTCTCACACCAGCTACACAGGTGGTGTAACAAAGGCATCAGCTCAAGCACATAGAGATCTGATCAATATG GCCAAGTTGGCCCAAACAAAATCTGGTTATTTAGGGGCTGTCCAAAAATGGTCGGGGGAGCATCTACCATTTGGTCAGTT TGATTTGCCATCAGGATTTTGGAAATAA Protein sequence : MLNDILSRVARVGAMHAGNRPNPPADRPQPCQGKPPTSPGKTIKHKSFLGALAGAVAGALVAAAVFTAAAAVAGAIAVAA IGTGGMGAALVVGVVKLAAGFGAVSLLGGLIDAVSSKVSAMVDSGSPSFGPVMAGSGNVFVEKQPVARATKDTVACTRHN SPQLIAQGSESVFVNDAPAARIDDKTVCGATIKEGASTVFFGSGQGTYLEIAEEFTALQRALLIAVEFLVPPSRGMFRGL GKLFTRGPMAVLKGMRAGALKTLEGLKSAVKCASEGFRNSRGLSRVTEAVRGFLKDPVYIASGEVIESRTDIALGQTLPL VFERTYRSASVHTGLLGRGWHDSWSEVATVTRDGLNTHVVITLAQGYDIDFTFHQDVQAVYCPHYPEFTLHRRGDGFSLW HRDQQTWRDFSVVQGERRLLSAIHDSHDNRIELVRDPKGYLRQVRHSDGVTLLLVWRGEYLHQIQRIDGGQKTLLAEYRQ DEQGRLVEANATHAYHLYYEYDAAHRLTRWHDNDQTWARYEYDTQGRCVYTTCADGFLTARFDYLPDRVVMTDGLGQRSE FGFNDLHLMSWEQSPLGHVTRYEYDEVGNLLREISPAGRVVEFGYLDDTGRVSTFTDASGHQWRYDYDDALRLCGVTDPL GREWRWVYDAEGNPERLTGPEASEVRFAWNRYGLLTQVSDAAGEVQARLQYDHRQRLLSATDAESRTQQMRYDMQDRVVQ WQRADGARFRLGYRRASWALPEQLIRPDDKEEQRQYDRHNNLLSYVDGNGALWRQSFGPFDLLTARTDAEGHTWRYAYDK ESQQLTTVIAPDGSRWQWWLDADGRVVRERDMTGTETHYGYDEDGLCVSVRNGEGDTRHFLYDARGLLLRETAPDDTLHY RYDAVGRLTEVSSATAHVQLDYDLRDRVVREWHNGTLLTRQVDDNARTVTRTLTWDGDAGDTTGTLAPLTSLFHYTRTGE LRQVQLPDGADLTLTYDAAGRESHRRGGSGFVQQREYDVMGWLTREMSGAQHDGHLLAAQTREYRYDGAGNLTGVRHNRD AEGYRLDATGRVQAVLSGGAGKPVDTTARFHYTRTGLPQEAGRLTEWQAGRLVQHDDTHYQYDRAGRLIRKQVVQPGYRP QVWQYRWDSRNQLRVVDTPTGERWLYRYDPFGRRVGKRCDQKAEETRYQWDGDQIAEIRHYRHGQLVARRHWVYNGWELV VQQRQHTGGDWETDFVTSSQNGTPQALFTPDGTLRWQAPTATLWGQRQAEKSESPDPGLAFAGQLRDSESGLCYNRFRYY DPAGGCYVSPDPIGIAGGENNYGYVQNPMCWVDPFGLAGCSSYLNAWGGRNAKAFKNFWNNSSHADFMKAWNNPAFKKNI KARLRGGGLTNSGGYHEWLPVSQGDKFKKMGFSFEEYMSLTSPTNKVGFLDKFGNYGSHTSYTGGVTKASAQAHRDLINM AKLAQTKSGYLGAVQKWSGEHLPFGQFDLPSGFWK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 42 |
