Gene Information

Name : NT05HA_1793 (NT05HA_1793)
Accession : YP_003008207.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : nucleoid-associated protein NdpA
Function : -
COG functional category : R : General function prediction only
COG ID : COG3083
EC number : -
Position : 1779568 - 1781307 bp
Length : 1740 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGTGGAAATTAAACAGCAGACAATATCGTGAAGAAACCTCGCAGAAGATTTCGTGGGGGCACTGGTTTGCTTTTTTTAA
TATTCTTTGGGCAATTTTTATTGGTGCCCGCTATGCATTTATTATTGACTGGCCGGATACGCTATTTGGCAAAATTTACT
TTTTTATCAGCTTATTAGGGCACTTTAGTTTTATTGTATTCGCCTTTTATTTGTTGGTCATATTCCCCCTCAGTTTTATC
GTTAAAAACCACCGCACTTTTCGCGGGCTCACAGTCATTCTTGCTACGATTGGTAATACGTTATTATTAGTTGATACAGA
AGTTTTTGTGCGGTTTAACCTGCATTTATCTTCTCTTGTTTGGAATTTGTTGGTGAATCCGGAAAACGGTGAATTGTCAC
GCAACTGGCAAGTATTCTTTACGCCGATGCCGTTGATTTTATTAGTGCAAATGTTGTTTTCCCGTTGGTCTTGGCAAAAG
TTACGTAGCTTGGAGCGGCAAAAATGGTTAAGAGGGGTTGGTGTCTTTTTTGTTTGCACCTTCATTGCAACGCATTTGAT
TTACGCGTGGGCGGATGCTTATTTATATCGTCCGATTACGATGCAACGTTCTAATTTTCCTCTGTCTCATCCGATGACGG
CCCGCTCTTTCTTGGAAAAACATGGTCTTATCAATAAGCAAGAATATTCCCAACGCCTAGAACAAGAAGGACGTTTAGAT
GCGTTAGCGATTAACTACCCGAAAAATCCATTGCTTTTTGAGGCACCGCAAGAAAAGACCAATGTGCTACTTATTACGGT
TTCCGGCTTACGTTACGATGCCATTGATATGGAAAAAATGCTGAATTTAGCGGAATTTGCACAACGTTCCACTCAATTTA
CCAACCATTATAGCAGTGGAAATAATAATAATGCCGGCTTAGTTGGGTTATTTTACGGATTGAATGCCAGCTACACAGAT
AGCCTGCTCAGCAATAAAACCCCTTCCGTTTTGGTTGAACGTTTTGCACAACAACAATATGTGCAAGGCTTATTTTCTGC
TAAGAAATTTGATAGCGCTATTTTCCGTCGCGCTATTTATCCGAAGGCGAAATTAAGCGGTGATAATAGCAACCAAGCTG
CGGTGCAGTCCTTTAAACGCTGGTTGGATTCCGCTAAAAAACAGGAAAAACCGTTTTGGGGTTATTTGAGTTTAAATATT
GAACCAAATTTGACGCAAGATAAATATCAGCAACAGCTTGCCAAACTGGATGAACTCTTCGGGCAGTTATTGCCGGAATT
GAATTTGCCGAACACGATTGTGGTGATTACTGCAGAGCATGGGTATAGTTTTAAGACATTGACGGAAAAAGAAGAAATCA
ATGATTTCTCCCGTGATGAAGTGCAGGTGCCGATGATTGTCCGTTGGCAAGGCTTACCGGCCACAAAAATCACCAAATTA
ACTACGCATGTGGATTTATTGCCGGCATTGATGAAACACGTTTTCAACGTAAAAAATCCGATTGGTGATTATGCGCAAGG
GCGTGATTTATTCAATTTGAAACAGGCAACGGATTGGGTCTTAGTCTCCAATTATCGTTGGAATGTGATTATTCAGCCGG
ACGGCACACAATATCACATTGATACGCGCGGAAACTATCAAAAATATGACCGCACTTATCAGAAAATTTCATCGGAGAGA
CCGCCGTTAGGCTTATTCTTGGAAGTGTTCAATCAAGAGCGATCATTTTTAGAAAAGTGA

Protein sequence :
MWKLNSRQYREETSQKISWGHWFAFFNILWAIFIGARYAFIIDWPDTLFGKIYFFISLLGHFSFIVFAFYLLVIFPLSFI
VKNHRTFRGLTVILATIGNTLLLVDTEVFVRFNLHLSSLVWNLLVNPENGELSRNWQVFFTPMPLILLVQMLFSRWSWQK
LRSLERQKWLRGVGVFFVCTFIATHLIYAWADAYLYRPITMQRSNFPLSHPMTARSFLEKHGLINKQEYSQRLEQEGRLD
ALAINYPKNPLLFEAPQEKTNVLLITVSGLRYDAIDMEKMLNLAEFAQRSTQFTNHYSSGNNNNAGLVGLFYGLNASYTD
SLLSNKTPSVLVERFAQQQYVQGLFSAKKFDSAIFRRAIYPKAKLSGDNSNQAAVQSFKRWLDSAKKQEKPFWGYLSLNI
EPNLTQDKYQQQLAKLDELFGQLLPELNLPNTIVVITAEHGYSFKTLTEKEEINDFSRDEVQVPMIVRWQGLPATKITKL
TTHVDLLPALMKHVFNVKNPIGDYAQGRDLFNLKQATDWVLVSNYRWNVIIQPDGTQYHIDTRGNYQKYDRTYQKISSER
PPLGLFLEVFNQERSFLEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_01048 YP_001437152.1 hypothetical protein Not tested Not named Protein 6e-128 42