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Name : rnhA (NT05HA_0244) Accession : YP_003006768.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Unknown Product : ribonuclease H Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0328 EC number : - Position : 235711 - 236175 bp Length : 465 bp Strand : + Note : An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids DNA sequence : ATGCGTAAACAAATCGAAATTTTTACCGATGGATCCTGCCTTGGAAACCCGGGCGCCGGAGGTATTGGCGTTCTGCTTCG TTACAAACAACATGAAAAAAGCCTCTCAAAAGGTTATTTCCTCACCACTAATAATCGCATGGAATTATTGGCCGTCATCG AAGCGTTAAATAGCCTCAAAGAGCCTTGCGACATCCATTTATACAGCGATAGCCAATACATGAAAAACGGCATCACGCAA TGGATTTTCAATTGGAAAAAAAACAATTGGAAAGCCAGTAGTGGCAAACCGGTAAAAAACCAAGATTTATGGATAGCATT AGATCAAGCTATCGCTCGTCATAAGGTTGATTGGCGCTGGGTTAAAGGACACACCGGGCACCGTGAAAATGAAATCTGCG ACCAGCTGGCAAAACAAGGTGCGGAGAACCCGACATTGCATGATGAAGGGTATCAAGGGGAGTAA Protein sequence : MRKQIEIFTDGSCLGNPGAGGIGVLLRYKQHEKSLSKGYFLTTNNRMELLAVIEALNSLKEPCDIHLYSDSQYMKNGITQ WIFNWKKNNWKASSGKPVKNQDLWIALDQAIARHKVDWRWVKGHTGHRENEICDQLAKQGAENPTLHDEGYQGE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rnhA | AAO17224.1 | RnhA | Not tested | tcd island | Protein | 2e-46 | 65 |
