Gene Information

Name : NT05HA_0028 (NT05HA_0028)
Accession : YP_003006563.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Virulence
Product : CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 29589 - 30329 bp
Length : 741 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGTGGAAGTGGTTGCATCCTTATGCAAAATCAGAAACACAATATCAATTATGCGGTAAGTTCAGCCCTTCTTTTGCGAT
TCTGACCGCACTTTTATTAGGTGTAGGCATCGTTTGGGGGCTTGCTTTTGCGCCTGCGGATTATCAACAGGGCAATAGCT
TCCGCATTATGTATGTGCATGTACCGACGGCCATTTGGTCTATGGGGATTTATGGTTCCATGGCGGTAGCTGCATTGGTT
GCCTTAGTATGGCAAATTAAACATGCTCAGTTAGCCATGATTGCCATGGCACCAATAGGCGCATTATTTACCTTTTTGGC
ATTGATTACCGGTGCCATTTGGGGCAAGCCAATGTGGGGGACTTGGTGGGTTTGGGATGCCCGTTTAACGGCTGAATTAA
TTCTATTTTTCTTATATTTAGGCGTATTAGCCATTTATTCCGCTTTTCAAGATCGTAATGTGGGGGCAAAAGCGGCGAGC
GTGTTATGCGTGGTTGGCGTGGTAAATCTACCGATTATCCATTTCTCGGTGGAATGGTGGAATACCCTGCATCAAGGGGC
AAGTATTACCAAATTGGAACGCCCGTCAATTGCTACACCAATGTTGATTCCGCTAATTTTATGTATCTTTGGTTTTATGA
CTTTATATATTTGGCTAACCTTAGTGCGTTATCGTACAGAGTTATTAAAAGAAGATAGTAAACGCCCTTGGGTTAAGGCG
TTGGCGGAAAAAATTAATTAA

Protein sequence :
MWKWLHPYAKSETQYQLCGKFSPSFAILTALLLGVGIVWGLAFAPADYQQGNSFRIMYVHVPTAIWSMGIYGSMAVAALV
ALVWQIKHAQLAMIAMAPIGALFTFLALITGAIWGKPMWGTWWVWDARLTAELILFFLYLGVLAIYSAFQDRNVGAKAAS
VLCVVGVVNLPIIHFSVEWWNTLHQGASITKLERPSIATPMLIPLILCIFGFMTLYIWLTLVRYRTELLKEDSKRPWVKA
LAEKIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 8e-41 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0028 YP_003006563.1 CcmC VFG1856 Protein 1e-49 50