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Name : NT05HA_0031 (NT05HA_0031) Accession : YP_003006566.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 31066 - 33024 bp Length : 1959 bp Strand : + Note : identified by Glimmer3; putative DNA sequence : ATGATTGCAGAATTAGGAAATTATGCGCTTGCTTTGAGTTTGGCAATCGCCGTACTATTGGCCATTTTCCCGTTGTGGGG GGCAGAAAAAGGTAATGCGCAGCTCATGGCATTGGCGCGTCCAATGACTTACGGTTTATTCATCGTATTAAGCGTGTCTT TCGGCGCGTTATTTTATTTATTCGCCGTTAATGATTTCAGCGTGCAATATGTGGTCAACAACTCGAACACCACGTTGCCG ATTTATTACCGCTTATCCGCAGTTTGGGGTTCTCATGAAGGCTCTTTGCTGTTATGGATTTGGTTGTTATCCTTGTGGAG CACGGCAGTTGCATTATTCAGTAAGCGTTTACCGCAAGAAGCTGCCGCCCGTGTACTGGGCATCATGGGGATTATCAGCA TCGGTTTCCTGCTTTTCGTGTTATTTACCTCGAATCCGTTTGCCCGTACTTTCCCTGATTTTCCGGTGGATGGCAAAGAA CTGAATCCGTTATTGCAAGATGTCGGCTTAATTTTCCACCCGCCGTTGTTATATATGGGGTATGTAGGTTTTTCCGTAGC GTTTGCTTTTTCCATCGCCTCTTTAATGACCGGTAAGTTAGATACTGCTTGGGCGCGTTGGTCTCGCCCTTGGACTATGG CTGCGTGGATCTTCCTCACCTTAGGTATCGTTTTGGGGTCTTGGTGGGCATATTATGAATTAGGCTGGGGTGGTTGGTGG TTCTGGGACCCGGTAGAAAACGCCTCTTTCATGCCGTGGTTAGCGGGAACCGCATTATTGCATTCTTTGGCTGTAACGGA AAAACGCGGATCCTTTAAAGCTTGGACGGTGCTTCTCGCTATCTTGGCCTTTTCTTTGTGTTTGCTCGGTACTTTCTTGG TACGCTCGGGGATTTTGGTTTCCGTGCACGCGTTTGCTTCCGATCCAACTCGCGGTTTATATGTCTTAGCCTATTTAATC GTGGTGATTGGTGGCTCACTAACTTTATATGCCTACAAAGGCAGTCAAATTCGTTCCCGCGATAATGCGGAACGTTATTC CCGTGAAAGCCTATTGTTGCTAAATAATATTTTATTAATGACCGCACTTTGTGTGGTCTTGCTCGGCACATTGTTGCCGC TTGTGCATAAGCAATTGGGTCTAGGGTCAATTTCCATTGGTGCGCCATTCTTTGATCAAATGTTCCTGATTATTATGACG CCGTTTGCCTTGTTATTGGGAATTGGGCCATTGGTGAAATGGCGTCGTGATCAGTTCTCTGCCATTCGCACTCCGGTTGT GGTGAGCGTCATTATCATGTTAATTGCAGGCTTTGCTTTGCCGTATTTATTACAAGACAAGATTACTGTCAGCGCGGTAT TGGGTACTATGATGACAGTAATTATTGTATTGCTTAGTCTTTATGAAATGCACCAACGGGCAACGCACCGCGACAGTTTC TTACAAGGTATCACGAAATTATCCCGTTCCCACTGGGGCATGCTCTTGGCGCACTTGGGTGTTGCCATGACAGTTTGGGG CATTGCCTTTAGCCAAAATTACAGCGTTGAACGTGATGTACGAATGAATGTGGGGGATTCGGTGCAAATTGCCGATTATG ATTTCACGTTCAAGGGCATTAGCGATGCTAACGGGCCTAACTATATCGGCGGTAAAGCGCAAATTGATATTACCCGTTAT GGTAAACCGGAAGCGACCTTGTTCGCCGAAAAACGTCTTTATACCGTTAGTAAAATGCCGATGACCGAAGCCGCCATTGA TTGGGGCTTTACCCGTGATTTATATGTCGCCCTAGGTGAAAAATTAGATAACAATGCTTGGGCGTTACGCTTATATTACA AACCGTTTATCCGTTGGATTTGGCTGGGTGGTCTGTTTATGGCGCTGGGTGGTTTATTGTGTATGTTCGACCGTCGTTAT CGGTTTAGCAAAATCTTAGAGAAAAAAGAGACTGCGTAG Protein sequence : MIAELGNYALALSLAIAVLLAIFPLWGAEKGNAQLMALARPMTYGLFIVLSVSFGALFYLFAVNDFSVQYVVNNSNTTLP IYYRLSAVWGSHEGSLLLWIWLLSLWSTAVALFSKRLPQEAAARVLGIMGIISIGFLLFVLFTSNPFARTFPDFPVDGKE LNPLLQDVGLIFHPPLLYMGYVGFSVAFAFSIASLMTGKLDTAWARWSRPWTMAAWIFLTLGIVLGSWWAYYELGWGGWW FWDPVENASFMPWLAGTALLHSLAVTEKRGSFKAWTVLLAILAFSLCLLGTFLVRSGILVSVHAFASDPTRGLYVLAYLI VVIGGSLTLYAYKGSQIRSRDNAERYSRESLLLLNNILLMTALCVVLLGTLLPLVHKQLGLGSISIGAPFFDQMFLIIMT PFALLLGIGPLVKWRRDQFSAIRTPVVVSVIIMLIAGFALPYLLQDKITVSAVLGTMMTVIIVLLSLYEMHQRATHRDSF LQGITKLSRSHWGMLLAHLGVAMTVWGIAFSQNYSVERDVRMNVGDSVQIADYDFTFKGISDANGPNYIGGKAQIDITRY GKPEATLFAEKRLYTVSKMPMTEAAIDWGFTRDLYVALGEKLDNNAWALRLYYKPFIRWIWLGGLFMALGGLLCMFDRRY RFSKILEKKETA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 1e-155 | 65 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 5e-127 | 53 |
