Gene Information

Name : Pjdr2_4583 (Pjdr2_4583)
Accession : YP_003013284.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Unknown
Product : cold-shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 5244520 - 5244720 bp
Length : 201 bp
Strand : -
Note : PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: bsu:BSU05120 cold-shock protein

DNA sequence :
ATGGAAACAGGTACTGTCAAATGGTTTAATGCGGAAAAAGGGTTTGGCTTCATTGAAAGGGAAAATGGCGACGATGTATT
CGTTCATTTTTCTGCGATTCAGAGTGAAGGATTCAAATCTTTGGATGAAGGTCAACGTGTTGAATTCAATGTTGTTAAAG
GCCAACGTGGACCCCAAGCGGAGAATGTTGTAAAACTGTAG

Protein sequence :
METGTVKWFNAEKGFGFIERENGDDVFVHFSAIQSEGFKSLDEGQRVEFNVVKGQRGPQAENVVKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 3e-15 59
cspH YP_216241.1 cold shock protein-like protein Not tested SPI-11 Protein 3e-04 42