Gene Information

Name : PC1_1057 (PC1_1057)
Accession : YP_003016642.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : AsnC family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1522
EC number : -
Position : 1231436 - 1231897 bp
Length : 462 bp
Strand : +
Note : PFAM: regulatory protein AsnC/Lrp family; SMART: regulatory protein AsnC/Lrp family; KEGG: eca:ECA1157 transcription regulator AsnC

DNA sequence :
ATGTTGGATAAAATTGATCGCACCCTGTTGAATATGTTGCAACAGGATTGCACGCTTTCGCTACAGACACTGGCCGATGC
GGTTAACTTGACCTCTACGCCGTGTTGGAAACGCCTGAAACGTCTGGAAGAAGAAGGGATTATCCGGGCTCGGGTGGCGC
TGCTGGATAATGAGCGTCTGGGATTAGGACTGACGGCGTTTGTCTTATTGAAGACGCAGCAGCACAACCGCGACTGGTAT
CAGACCTTCACCCGCGTGGTGTCCGACATGCCGGAAGTGTTGGCTTTTTATCGTATGGCCGGTGAATACGATTACCTGAT
GCAGGTTCAGGTCGCTGATATGAAAAGCTATGATAATTTCTATAAACGGTTGGTGAATGGTATTCCTGGGCTGGTCGATG
TAACATCTAGCTTTGCTATGGAACGAATCAAACATACCACGGCATTGCCCTTATCCCTGTGA

Protein sequence :
MLDKIDRTLLNMLQQDCTLSLQTLADAVNLTSTPCWKRLKRLEEEGIIRARVALLDNERLGLGLTAFVLLKTQQHNRDWY
QTFTRVVSDMPEVLAFYRMAGEYDYLMQVQVADMKSYDNFYKRLVNGIPGLVDVTSSFAMERIKHTTALPLSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tinR NP_454916.1 transcriptional regulator Not tested SPI-6 Protein 1e-27 41