Gene Information

Name : PC1_1710 (PC1_1710)
Accession : YP_003017287.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : cold-shock DNA-binding domain-containing protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 1971178 - 1971399 bp
Length : 222 bp
Strand : -
Note : KEGG: eca:ECA2659 cold shock-like protein; TIGRFAM: cold shock domain protein CspD; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein

DNA sequence :
ATGGAGACAGGTACTGTTAAATGGTTCAATAATGCCAAAGGGTTTGGTTTTATCTGTCCAGAAGGGGGTGGTGACGATAT
TTTCGCGCACTACTCAACCATTCAAATGGATGGCTACCGGACTCTGAAAGCCGGACAGGTTGTCAGGTTTGATGTTCATC
AAGGGCCGAAAGGTAATCACGCTTGCCTGATCGTCCCGCAAGTCGCCGAGACCGCATCCTGA

Protein sequence :
METGTVKWFNNAKGFGFICPEGGGDDIFAHYSTIQMDGYRTLKAGQVVRFDVHQGPKGNHACLIVPQVAETAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 1e-14 53