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Name : PC1_0207 (PC1_0207) Accession : YP_003015803.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : major facilitator superfamily metabolite/H+ symporter Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG2223 EC number : - Position : 248141 - 249538 bp Length : 1398 bp Strand : + Note : TIGRFAM: metabolite/H+ symporter, major facilitator superfamily (MFS); PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: eca:ECA0225 shikimate transporter DNA sequence : ATGGACACCTCAACTACGCCAACACTCTCACAGCCTGGCGGCTCAGTACTTCATCAGGATGATTCAATTTCATCTGATAA CGCCCTACAAACACAGTCAGTAAGCCATTCTCAGAATAAAGCGAAACGTGCCGCCTGGGGCAGCTTTGTGGGGGCCGTGG TGGATTGGTATGATTTCTTGCTGTACGGAATTGTTGCCGCTCTTGTATTTAATACCGAATTTTTCCCTCAGGTCAGCCCG ACAATGGGGACGCTGGCAGCATTTGGCACGTTTGGCGTGGGGTTTCTATTCCGTCCGCTTGGCGGTATGGTGTTTGGGCA CTTCGGCGATAAGCTGGGTCGTAAACGGATGTTGATGATCACGGTCTGGATGATGGGCATTTCCACCGCGCTGATTGGCC TGTTGCCGTCGTTTGACTCCATCGGTTGGTGGGCGCCGGTGCTGCTGGTTATGCTGCGAGCCATTCAGGGCTTTGCTGTC GGTGGCGAATGGGGCGGTGCGGCGCTGTTGGCGGTAGAGAGCGCGCCAAAGAAGAAGAAAGCCTTTTACAGCAGCGGCGT ACAGGTTGGCTTTGGGGTCGGGTTATTACTGGCTACAGGGTCGGTCTCGCTGGTTAGCAATTTGACGACCAACGAAGAAT TTATCACCTGGGGCTGGCGTTTGCCGTTCTTATTCAGCCTGATTCTGGTTGCGATTGCCTGGTGGGTGCGTAACGGGATG GATGAGTCTCAAGAGTTTGAGGCGAATAAGACTCTGGGAGAAAGGGCAAACAAACTGCGTTCGTTCCCCATTATGGAAGC ACTACGCCAACACCCGAAAGCCTTTCTGCTGATTATTGCGCTACGGCTTGGAGAACTGTTGACGATGTATATCGTCACCG CGTTTGCGCTCAATTACTCCACCACTCATCTTGGGCTATCGCGGGATATTTTCCTGAATATCGGGCTGCTGGTGGGGGCG ATCAGCTGCGTGTCTATTCCTTTCTTTGCCTATCTGGCGGATAGCTTTGGCCGACGTCGGATCTACGTTACTGGTGCGCT GATTGGTGCCGCGAGTGCAGTGCCGTTCTTTATGGCGCTGGAAAGCCATAACACGCTGCTGATTTTGTTCTTTGCCATCA TGCTGGCGAACATTGCCCACGATATGATTGTTAGCGTACAGCAGCCGATGTTTACCGAGCTATTTGGTACCGCTTATCGC TATAGTGGAGCGGGGGTGGGTTATCAGGTTGCCAGCGTGGTAGGCGGCGGATTTACGCCTTTTATCGCTGTTCTGCTGGT GCAGTTTATGGATGGTTCATGGCACGCCGTGGCGGCTTACCTCGCCATTGGCTGTTTGCTGTCGGCGATTGTCGGGATGC AAATGAAAGCAAAATCGGCGGATGCCTTACCTCGCTAA Protein sequence : MDTSTTPTLSQPGGSVLHQDDSISSDNALQTQSVSHSQNKAKRAAWGSFVGAVVDWYDFLLYGIVAALVFNTEFFPQVSP TMGTLAAFGTFGVGFLFRPLGGMVFGHFGDKLGRKRMLMITVWMMGISTALIGLLPSFDSIGWWAPVLLVMLRAIQGFAV GGEWGGAALLAVESAPKKKKAFYSSGVQVGFGVGLLLATGSVSLVSNLTTNEEFITWGWRLPFLFSLILVAIAWWVRNGM DESQEFEANKTLGERANKLRSFPIMEALRQHPKAFLLIIALRLGELLTMYIVTAFALNYSTTHLGLSRDIFLNIGLLVGA ISCVSIPFFAYLADSFGRRRIYVTGALIGAASAVPFFMALESHNTLLILFFAIMLANIAHDMIVSVQQPMFTELFGTAYR YSGAGVGYQVASVVGGGFTPFIAVLLVQFMDGSWHAVAAYLAIGCLLSAIVGMQMKAKSADALPR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1067 | YP_853084.1 | shikimate transporter | Not tested | PAI IV APEC-O1 | Protein | 3e-140 | 73 |
