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Name : PC1_2198 (PC1_2198) Accession : YP_003017773.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Virulence Product : YscI/HrpB family type III secretion apparatus lipoprotein Function : - COG functional category : - COG ID : - EC number : - Position : 2527472 - 2527843 bp Length : 372 bp Strand : - Note : TIGRFAM: type III secretion apparatus protein, YscI/HrpB family; KEGG: eca:ECA2094 type III secretion protein DNA sequence : ATGAAAATTAATCATGCCACTACGCTGTCTCAGCCGGGGGATGCGCCGCTGGCGGACAACGGCACGTCTTTTTCCTTTTC CGCCACGAATCAGGATGTGTCCTGGTTCAGCGCGGCGCTGTCGTCGGCACCAATGACGGCAGAAAGCGGTAATAGTCAGT GGCTGGGTGCGCTGGCGGAAAAATCTCAGGGACTGAACGGCGTCTTTAAATCCGCCGAACGCGACGTCAGCCAGTCGATG CGTTCCAATAATCCAAAGGATGTACTGGATGCGACCCGAACGCTGTCCTCGTTCTATCTGGAAAGTCTGCTGAGCGCCAA ACTGGTGGCGAAAAGTGTACAGAGTCTGGAAAAACTCACCAACTTACAGTAG Protein sequence : MKINHATTLSQPGDAPLADNGTSFSFSATNQDVSWFSAALSSAPMTAESGNSQWLGALAEKSQGLNGVFKSAERDVSQSM RSNNPKDVLDATRTLSSFYLESLLSAKLVAKSVQSLEKLTNLQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrpB | AAB49173.1 | HrpB | Virulence | Hrp PAI | Protein | 1e-17 | 50 |
| hrpB | AAT96360.1 | HrpB | Virulence | S-PAI | Protein | 3e-15 | 44 |
| hrpB | AAT96280.1 | HrpB | Virulence | S-PAI | Protein | 1e-15 | 44 |
| hrpB | AAT96321.1 | HrpB | Virulence | S-PAI | Protein | 9e-16 | 44 |
| hrpB | ABA47315.1 | HrpB | Virulence | S-PAI | Protein | 2e-15 | 42 |
