Gene Information

Name : PC1_2422 (PC1_2422)
Accession : YP_003017989.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : heme exporter protein CcmC
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0755
EC number : -
Position : 2780547 - 2781287 bp
Length : 741 bp
Strand : -
Note : TIGRFAM: heme exporter protein CcmC; PFAM: cytochrome c assembly protein; KEGG: eca:ECA1884 heme exporter protein C

DNA sequence : 
ATGTTGAAAAAAAACTATCAGCTTACGCAGCCGGATCGCCTTTATGGCCTTTGCGGCAGGCTTATCCCGTGGTTCGCCTT
GATTAGCGCGGTGCTGTTGATCGGCGGTAGCCTGCTGGGATTTGGTTTTGCACCTGCGGATTATCAGCAAGGGCAAGGGT
ATCGCATCATGTACCTGCACGTGCCAGCGGCCGTATGGTCGATGGGCGTTTATGCCGTGATGGCGATGTTTGCGCTTATC
GGACTGATTCGGCAGTCAAAAACGGCAGAGCTTGCCGTCGCGGCGATGGCGCCGATCGGGGCAGTCTTTACCTTCATTGC
GCTGACTACGGGATCCACCTGGGGTAAACCGATGTGGGGGACCTGGTGGGTCTGGGATGCGCGCCTGACATCGGAACTCG
TTCTGCTGTTTCTGTATGTGGGCATCATCGCGCTCTACAACGCGTTTGACGATCGTCGTCTTGCCGGTCGTGCGGCGGCC
ATTCTGGTACTGGTCGGCGTGGTGAATTTACCCATCATCCATTTCTCGGTCGAGTGGTGGAATACCTTGCATCAAGGATC
GACAAAAATGCAGAAGACCATCGATCCCGCCATGCGTCTTCCGCTGCGAATCATGATGTTAGGTTTCATGAGTTTTTTCG
TGACGTTGTCACTCATGCGCTTGCGTAATTTGATACTGATGCAGCAGCGTCGTGCGCCTTGGGTTGCGGCGCTGGTCAAT
AAAGAGGGAGTCGCACGATGA

Protein sequence : 
MLKKNYQLTQPDRLYGLCGRLIPWFALISAVLLIGGSLLGFGFAPADYQQGQGYRIMYLHVPAAVWSMGVYAVMAMFALI
GLIRQSKTAELAVAAMAPIGAVFTFIALTTGSTWGKPMWGTWWVWDARLTSELVLLFLYVGIIALYNAFDDRRLAGRAAA
ILVLVGVVNLPIIHFSVEWWNTLHQGSTKMQKTIDPAMRLPLRIMMLGFMSFFVTLSLMRLRNLILMQQRRAPWVAALVN
KEGVAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ccmC AAN62109.1 putative heme exporter protein C Not tested PAGI-2(C) Protein 9e-48 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2422 YP_003017989.1 heme exporter protein CcmC VFG1856 Protein 1e-41 47