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Name : PC1_2428 (PC1_2428) Accession : YP_003017995.1 Strain : Pectobacterium carotovorum PC1 Genome accession: NC_012917 Putative virulence/resistance : Unknown Product : cytochrome c-type biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 2784387 - 2786261 bp Length : 1875 bp Strand : - Note : TIGRFAM: cytochrome c-type biogenesis protein CcmF; PFAM: cytochrome c assembly protein; KEGG: eca:ECA1879 heme lyase subunit NrfE DNA sequence : ATGTTGTTATTGCCAGAATGTGGATATGTGGCGCTGTTGCTGGCGGTTTGCGTCGGTGTGGCGACAGCGTTGCTAACATT TTCAGGCTACACCCTGCGCTGGTCGGGTACGTACCGACTGGCGCGGTGCTGGACGTTGGTGCTGTTTGGCTTTGTGCTGT TCGCGTTTGTCGCGTTGACGCTGAGCGTGGTGCAGGATGATTTTTCTGTTAATTACGTCGCTCAGCATAGCCACCGTGAT TTACCGCTAGGGCTAAAGATTGCCGCGGTCTGGGGCGGGCATGAAGGATCGCTACTGCTGTGGCTGTTATGTTTAACTGG CTGGAGCGCTGCGTTCGCCTTCCGCTACCGTAAGGCGACGAGCGACCTGTTCCCGCTGACGCTGGCGGTATTGGCCGTGA TAGCGACCGCGTTGCTGGTCTTCATTGTATTTTTTTCCGATCCCTTTGTGCGTCTCTTCCCGCCTGCGGTGGCGGGAAGG GATCTCAACCCTATGCTGCAACACATTGGCCTCATCCTCCATCCGCCGCTGCTCTATATGGGCTATGGCGGATTAACCGT GAGTGCGGCGCTGGCGTTAGCGGCCCTGATCCACGGTGAGTTTACGGCACCTGCTGCCTGGATCTGCTGGCGCTGGACGC TGCCTGCATGGAGCCTGTTAACGCTGGGGATCATCCTGGGATCGTGGTGGGCCTATAACGAACTCGGCTGGGGAGGATGG TGGTTCTGGGATCCGGTAGAAAATGCCTCGCTGCTCCCTTGGTTAACGGCCAGTGCATTGCTTCACAGCCTGTCGGTTAC CCGCATGCGCGGCATCTTCCGTCATTGGTCGCTCATATTGGCATTGCTGACGTTCATTTTATGTCTGCTGGGCACGCTGA TCGTGCGCTCCGGGATACTGGTTTCCGTCCATGCCTTCGCTCTCGAACATGACCGCGCGGTGCCTTTATTTATTCTGTTT GCCTGCTTAAGTATGGCGGCGCTGGCGGTTTACGGCTGGCGCGCTCAGCTTGTCCGCTCCGCTGCCCGCTTCTCCGGCTG GTCGCGGGAAATCGCGCTACTGCTGGTGCTGCTGTTATTCAGCGCCGTCGCGCTGGTGGTGCTGCTTGGCACGCTTTACC CGATGATCTATGGGTTAGCGGGGTGGGGAAAGATCTCCGTAGGTGCGCCCTATTTTAATCGTGTGCTCTTGCCCTTCGGC GGGTTGATGCTGTTGCTCATTGGGGTAGCGGCAGGTGGCTATTGGAAACGCAGCGCGCGATGGCCTGTCCGGCGCTTAGG CATCACGCTGGCGGTCGGTGTCGTCACCTCGCTGATCCTGTGGCCGTATGGGGTCGCCGTCGCTTTGGCTGCGGGGTTGA TCGGCTGGGTGATGGCTGCGCAGTGGTTACAGCCGCTGTCCGCGATACGCCACCAGCTTCCTGCACTGCTGGCACATACG GGCGTGGCGCTGTTTGCCTTGGGGATTGTGTTCTCTGCGGGCAGCAAACAGGAAATCAGCGCCAATGTGGGGCAGGGAGA ACAGGTCACGCTGGGCGACTACCATTTTCGCTTTTTACAGCTGGATTTAGTGGCGGCGCAGAATTACACCGCAGAGCAGG CCGTGATTGCGATTTATCGTGGCGACTCGCCAATCGCCCGCGTCATGCCGGAACGTCGTTATTACAACGCACGCAAGCAG CAGATGATTGAACCGGGTATTGCCTGGGGGCCGATCAGAGAATGGTATGCCGTGATGGGCGAGAAAACCGGCGAAAACCG CTACGCCATGCGGTTTTATGTGCAAACCGGTGTTCGCTGGGTGTGGGGTGGCGGCCTGTTGATGGTCGCGGGCGCATTGC TGGGGTGGTTCAGAGGAAGAAAAGCCTATGACTAA Protein sequence : MLLLPECGYVALLLAVCVGVATALLTFSGYTLRWSGTYRLARCWTLVLFGFVLFAFVALTLSVVQDDFSVNYVAQHSHRD LPLGLKIAAVWGGHEGSLLLWLLCLTGWSAAFAFRYRKATSDLFPLTLAVLAVIATALLVFIVFFSDPFVRLFPPAVAGR DLNPMLQHIGLILHPPLLYMGYGGLTVSAALALAALIHGEFTAPAAWICWRWTLPAWSLLTLGIILGSWWAYNELGWGGW WFWDPVENASLLPWLTASALLHSLSVTRMRGIFRHWSLILALLTFILCLLGTLIVRSGILVSVHAFALEHDRAVPLFILF ACLSMAALAVYGWRAQLVRSAARFSGWSREIALLLVLLLFSAVALVVLLGTLYPMIYGLAGWGKISVGAPYFNRVLLPFG GLMLLLIGVAAGGYWKRSARWPVRRLGITLAVGVVTSLILWPYGVAVALAAGLIGWVMAAQWLQPLSAIRHQLPALLAHT GVALFALGIVFSAGSKQEISANVGQGEQVTLGDYHFRFLQLDLVAAQNYTAEQAVIAIYRGDSPIARVMPERRYYNARKQ QMIEPGIAWGPIREWYAVMGEKTGENRYAMRFYVQTGVRWVWGGGLLMVAGALLGWFRGRKAYD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 6e-62 | 42 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 4e-68 | 42 |
