Gene Information

Name : PC1_2698 (PC1_2698)
Accession : YP_003018264.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1126
EC number : -
Position : 3061468 - 3062262 bp
Length : 795 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: eca:ECA2970 ABC-transporter ATP-binding protein

DNA sequence :
ATGAGTGAAACTATGACTTTGAATGAAGATATCGTCCTGCGTATTCGCGGGCTTCAGAAACGCTTTGGTGCCGTTGAGGT
CTTAAAGGGGATCGATCTGGATGTACGCCGTGGCGAAAAAATTGCCATCATCGGCGGCAGCGGCTCGGGAAAAAGCACCC
TGCTGCGCTGCCTGAATTTTATGGAGATCCCCAGCGCCGGCACCATCGAACTCGATGGCGTGGTACTGGGAAAAACCAAT
GCGCAAGGCCAGCGTGATTATCCCGAAAAGCAGCTGTGCGCCGTGCGGGAACGCGTGGGCATGGTGTTTCAGCAATTCAA
CCTGTTTCCCCATCTGACCGTGCTGGAAAACGTGCGTGAAGCGCTGGTGTCGGTGAAGAGAATGCCACGGCATGACGCGG
ATATCATCGCCAAAGCCCAGTTGGAAAAGGTCGGGCTGAGCAACAAGCAAGACGCCCGCCCCGGCAGCCTATCCGGCGGT
CAGCAGCAGCGCGTCGCGATTGCGCGCGCGCTGGCGATGTCACCGGAAGTTATGCTGTTCGATGAACCGACATCGTCACT
GGATCCAGAACTGGTGGGCGAAGTGCTGCACACCATCCACGCGCTCGCGGAGGAAGGCCGTACCCTGCTGTTAGTCACCC
ATGAACTGGGATTCGCCTATCACTTCGCCGACCGCGTTATCTTTATCGAAAATGGAGTGATCCACGAAATGGGCAGCGCC
GAGCAGGTGCTCAAAAATCCGCAGCAACCCCGTACCCAAGCCTTTCTCGCCCGCTTTGCCGAGCGAGCGTTTTAA

Protein sequence :
MSETMTLNEDIVLRIRGLQKRFGAVEVLKGIDLDVRRGEKIAIIGGSGSGKSTLLRCLNFMEIPSAGTIELDGVVLGKTN
AQGQRDYPEKQLCAVRERVGMVFQQFNLFPHLTVLENVREALVSVKRMPRHDADIIAKAQLEKVGLSNKQDARPGSLSGG
QQQRVAIARALAMSPEVMLFDEPTSSLDPELVGEVLHTIHALAEEGRTLLLVTHELGFAYHFADRVIFIENGVIHEMGSA
EQVLKNPQQPRTQAFLARFAERAF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-21 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_2698 YP_003018264.1 ABC transporter-like protein NC_012469.1.7686878. Protein 3e-23 42