Gene Information

Name : PC1_3032 (PC1_3032)
Accession : YP_003018591.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Unknown
Product : BadM/Rrf2 family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG1959
EC number : -
Position : 3416983 - 3417477 bp
Length : 495 bp
Strand : -
Note : TIGRFAM: iron-sulfur cluster assembly transcription factor IscR; transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: eca:ECA3238 DNA-binding transcriptional regulator IscR

DNA sequence :
ATGAGACTGACATCCAAAGGCCGTTACGCCGTTACCGCCATGCTCGATGTGGCTCTGCATTCCCAGGAAGGGCCAGTTCC
ATTGGCGGATATTTCTGAACGCCAAGGTATTTCACTGTCTTATCTGGAGCAGCTGTTTTCACGCTTGCGTAAGAATGGAC
TGGTTGCCAGCGTTCGTGGCCCGGGCGGCGGTTACCTGCTGGGTAAAAGCGCGAATGAAATCGCCGTTGGTATGGTTATT
TCTGCCGTCGATGAATCCGTGGATGCAACACGCTGCCAGGGTCGTGAAGGCTGTCAGGGTGGCGATCGCTGCCTGACACA
CACGCTGTGGCGCGATCTGAGTGACCGTATTACCGACTTCCTGAATAACATCACGCTGGACGAGCTGGTGAATAATAAGG
AAGTGCTGGATGTTGCGGATCGTCAGGATGCGGACATTCGCCGCACCGCCAATGGACGTATTCAGGAAACGATCAACGTT
AACCTGCGCGCCTGA

Protein sequence :
MRLTSKGRYAVTAMLDVALHSQEGPVPLADISERQGISLSYLEQLFSRLRKNGLVASVRGPGGGYLLGKSANEIAVGMVI
SAVDESVDATRCQGREGCQGGDRCLTHTLWRDLSDRITDFLNNITLDELVNNKEVLDVADRQDADIRRTANGRIQETINV
NLRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96061.1 rrf2 family protein Not tested T-PAI Protein 1e-47 66