Gene Information

Name : PC1_3544 (PC1_3544)
Accession : YP_003019096.1
Strain : Pectobacterium carotovorum PC1
Genome accession: NC_012917
Putative virulence/resistance : Virulence
Product : glycyl-radical enzyme activating protein family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG1180
EC number : 1.97.1.4
Position : 3993817 - 3994767 bp
Length : 951 bp
Strand : +
Note : KEGG: eca:ECA3769 putative pyruvate formate-lyase activating enzyme; TIGRFAM: glycyl-radical enzyme activating protein family; PFAM: Radical SAM domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein

DNA sequence : 
ATGCAACACGCGCAGAAAACCACAGGACGACTCTTCAATATTCAGAAGTATTCGATCTACGACGGGGAAGGCGTCCGCAC
GCTGATCTTTATGAAAGGTTGCAATATCCGTTGCCCTTGGTGCGCAAACCCAGAGGGGATCAGCAACGCCTATCAGATCA
TGTTCTCTCAGGATAAATGCATCGACTGCGGCAAATGTGCGGAGGTTTGCCCGACGGGTGTTCACCGCATGCAAGCAGAC
AGCAGCGGCCAATGGCACCATCATCTCGATCGCACAGCGGACTGCATTGGTTGCCGAAAGTGTGAAACAGCCTGTCTGTC
CGGCGCGCTGGACGTCATAGGACAAGAGATGACGGTTACGGAATTGATGGAAATCATCATGCAGGATTACCCTTTTTATC
TGTCCTCTGGCGGCGGCGTCACCCTGAGCGGCGGAGAAATGAGTCTACAAACGGATTTCGCTGTCGATCTGCTCACCGCC
TGCAAACGCATGATGATTCACACCGCGGTCGAAACACAGGGCACAACCCTGAAATCCTACTACAGCAGATTAGCCGCCGT
AACGGATTTATTCCTTTTTGATATCAAACACATTGATACCCAGCAGCACAAGGCGCTGTTTGGCGTTGGGAATGAAAACA
TACGGCGAAATCTGGAACATTTGGTCGGGCTGGGAGCCGATATCGTCATTCGTATGCCACTCGTTCGCGGCTATAACGAT
TCGTACGATGCGGTTACCGACGCCATTCACTATGTCCAGACGCTGGCACAGCGCGGCAATATACAGCGCATCGACGTACT
GCCCTACCACCAGCTAGGCCGAAAAAAATACGACAGGCTGGGGATGATTTACCCAATAAACGAGGATCCCAGTTACAACG
AGGAAGAGTTAAATCGTTTGGAGACGTTCTTTAACGAATTTGATTTCGATATTCGTCTGGTTCGTCATTAA

Protein sequence : 
MQHAQKTTGRLFNIQKYSIYDGEGVRTLIFMKGCNIRCPWCANPEGISNAYQIMFSQDKCIDCGKCAEVCPTGVHRMQAD
SSGQWHHHLDRTADCIGCRKCETACLSGALDVIGQEMTVTELMEIIMQDYPFYLSSGGGVTLSGGEMSLQTDFAVDLLTA
CKRMMIHTAVETQGTTLKSYYSRLAAVTDLFLFDIKHIDTQQHKALFGVGNENIRRNLEHLVGLGADIVIRMPLVRGYND
SYDAVTDAIHYVQTLAQRGNIQRIDVLPYHQLGRKKYDRLGMIYPINEDPSYNEEELNRLETFFNEFDFDIRLVRH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42072.1 hypothetical protein Not tested PAI II 536 Protein 1e-106 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
PC1_3544 YP_003019096.1 glycyl-radical enzyme activating protein family VFG1591 Protein 8e-107 68