Gene Information

Name : GM21_3422 (GM21_3422)
Accession : YP_003023204.1
Strain : Geobacter sp. M21
Genome accession: NC_012918
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 3956295 - 3956969 bp
Length : 675 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: gbm:Gbem_0838 ABC transporter

DNA sequence : 
ATGAGTAATCTGCTAGAGGTGAAGAACCTCTACAAGTCCTACGGCGAGGCCGAGGCCAAGGTCGAGGTGCTGAAGGGAAT
AGATCTCTGCGTGGAGGCGGGCGACACAATAGCCATGGTGGGCCCTTCGGGCGCCGGCAAGAGCACGCTCTTACACATCA
TGGGGACCATCGACCATCCCACAAGCGGCGAGGTGCTCTTCGAGGGAAAGCCGGTCTTCACGCTCGGGGACCAGCCGCTG
GCTTCCTTCAGGAACCGCTCCATCGGCTTCGTGTTCCAGTTCCACCATCTCCTCCCCGAGTTCACGGCGCTGGAGAACGT
GATGATGCCGCTTTTGATCGGCGGCGAGAAGAGGTCCAAGGTTGAAGGGCGCGCCCGCGAGCTGTTGCACGACGTGGGGC
TCGCGCACAGGGTGACCCACCGGCCGGGCGAGCTTTCCGGGGGCGAGCAGCAGCGCGTCGCCATCGCGCGGGCGCTGGTG
CGGCAGCCCAGGCTCCTTCTGGCGGACGAGCCTACCGGGAACCTCGACATGAAGACCAGCCACGAGGTGCATGAGCTGCT
CTACTCGATACAGCGCAGTACCGGCATCACGCTGGTGATCGTCACCCACAACGAGCAGCTGGCGGCGGGGATGAACCGCA
CCATCCGCATGGTGGACGGCAGGATCGTGGAATAA

Protein sequence : 
MSNLLEVKNLYKSYGEAEAKVEVLKGIDLCVEAGDTIAMVGPSGAGKSTLLHIMGTIDHPTSGEVLFEGKPVFTLGDQPL
ASFRNRSIGFVFQFHHLLPEFTALENVMMPLLIGGEKRSKVEGRARELLHDVGLAHRVTHRPGELSGGEQQRVAIARALV
RQPRLLLADEPTGNLDMKTSHEVHELLYSIQRSTGITLVIVTHNEQLAAGMNRTIRMVDGRIVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 8e-25 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-33 43
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-33 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-33 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
GM21_3422 YP_003023204.1 ABC transporter NC_012469.1.7686878. Protein 2e-42 48
GM21_3422 YP_003023204.1 ABC transporter CP001581.1.gene798.p Protein 1e-41 46
GM21_3422 YP_003023204.1 ABC transporter NC_008702.1.4606598. Protein 2e-36 45
GM21_3422 YP_003023204.1 ABC transporter CP001581.1.gene598.p Protein 4e-38 42