Gene Information

Name : SSUBM407_0578 (SSUBM407_0578)
Accession : YP_003028340.1
Strain : Streptococcus suis BM407
Genome accession: NC_012926
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 639517 - 640218 bp
Length : 702 bp
Strand : +
Note : Orthologue of S. suis P17 (AM946016) SSU1211

DNA sequence : 
ATGTCCTATATCCAAGTAAAGAATTCGTCAAAATACTACCAAATGGGAGATGCGACCATTGTGGCCAATGATGGTGTGTC
CTTTGAGATTGAGCAGGGTGAGCTGGTCATCATTCTGGGTTCATCTGGTGCGGGCAAATCCACTCTGCTCAATATCTTAG
GTGGCATGGACAGCAACGACGAGGGGGAGGTTTGGATTGACGGTGTGGATATCGCCAAGCTGTCAAGTCATGAACTGACC
AATTATCGTAGAGATGATGTAGGTTTTGTATTTCAATTTTATAACTTGGTTGCCAATCTGACCGCCAAGGAAAATGTGGA
ACTGGCAGCAGAAATCGTCAAGGATGCCTTGGATGCCGAGGAGGTCTTGGAACAGGTCGGACTCGGTCACCGAATCAATA
ATTTCCCTGCTCAGCTTTCAGGCGGTGAACAACAACGTGTGGCCATTGCCCGTGCTGTTGCCAAAAAGCCTAAAATTTTG
CTTTGCGATGAACCAACTGGCGCTCTGGACTACCAAACAGGTAAGCAGGTTTTACAAATCCTACAAGATATGTCCCGCAA
GCAGGGGGCAACGGTGATTATCGTGACCCACAATAGTTCCCTAGCCCCTATTGCAGACAGGGTCATTCGGATGCGGGATG
CCCGTGTGCACTCCGTTGAGTTACACGCAGAACCACAGGATATTGCAAGCCTAGAATATTAG

Protein sequence : 
MSYIQVKNSSKYYQMGDATIVANDGVSFEIEQGELVIILGSSGAGKSTLLNILGGMDSNDEGEVWIDGVDIAKLSSHELT
NYRRDDVGFVFQFYNLVANLTAKENVELAAEIVKDALDAEEVLEQVGLGHRINNFPAQLSGGEQQRVAIARAVAKKPKIL
LCDEPTGALDYQTGKQVLQILQDMSRKQGATVIIVTHNSSLAPIADRVIRMRDARVHSVELHAEPQDIASLEY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 2e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SSUBM407_0578 YP_003028340.1 ABC transporter ATP-binding protein NC_012469.1.7685735. Protein 2e-86 78
SSUBM407_0578 YP_003028340.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 3e-40 43
SSUBM407_0578 YP_003028340.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-37 43
SSUBM407_0578 YP_003028340.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-39 42
SSUBM407_0578 YP_003028340.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 2e-33 42