Gene Information

Name : dnaQ (HCDSEM_018)
Accession : YP_003038660.1
Strain : Candidatus Hodgkinia cicadicola Dsem
Genome accession: NC_012960
Putative virulence/resistance : Unknown
Product : putative DNA polymerase III, epsilon subunit
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0847
EC number : -
Position : 16711 - 17259 bp
Length : 549 bp
Strand : -
Note : predicted based on weak similarity to TIGRFAM dnaQ_proteo and related protein in nr

DNA sequence :
GTGAGCTGCTTTAAAATCAGAGAAATAATACTAGACACCGAAACCACGGGCTTGAGTGTTAAAACCGACAGGCTGATAGA
GCTGGCAGCAATAAAGCTCGAAGATGGCAGGCGCACGCCACACACGTACCACAGCTACTTCAATCCGCAGCCTGTAAAAG
TCAGTAGGAGCGCGTTCAACGTGCACGGAATCTCAAACGAGTTTCTAAGTGACAAGCCAGCGTTTAAAAGCTGCGCTCGC
GAGTTTCTCGAGTTTGTAGCCGGCCACGAGCTGATAGCACACAACGCGAGGTTTGACCTTCAGATAATAAATCGCGAGCT
TCAAATGGCTGGCGCAGACCCTATTGACGCCGGCTGCTGGCGCGACTCGCTTTCGATCGCTAAACAGCTGTTCCCGAACA
GGTCAAACTCGATGGCAGCGCTGTGCAAACGCTTTAATCTTGAATGCGAAACCGAAACTCACAGCGCGGCGCGAGACTGC
GAGCTGCTAGCGCGCGTCTACGAGCTAATTCTAGACGAAAAGCGACGACGCATAGCAGCGCTAGACTAA

Protein sequence :
MSCFKIREIILDTETTGLSVKTDRLIELAAIKLEDGRRTPHTYHSYFNPQPVKVSRSAFNVHGISNEFLSDKPAFKSCAR
EFLEFVAGHELIAHNARFDLQIINRELQMAGADPIDAGCWRDSLSIAKQLFPNRSNSMAALCKRFNLECETETHSAARDC
ELLARVYELILDEKRRRIAALD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dnaQ AAO17223.1 DnaQ Not tested tcd island Protein 8e-25 42