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Name : PAU_01919 (PAU_01919) Accession : YP_003040755.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : Type III secretion system outer membrane Function : - COG functional category : - COG ID : - EC number : - Position : 2154942 - 2156747 bp Length : 1806 bp Strand : - Note : - DNA sequence : GTGGTTCAATATCTATTCAATACTTATTATTTCAACATGAAAGGAGAAATCATGCATATACAAGTCACTAAATTTCCCAC TCCCATTCTCCAAAATATCAAGCATACACAAATCGCTAAATTTCCTACGTTCCTTATCAAAAATATCAAGCATATAACCT CAAAAATATCGGCAAATAGAGCAACTTTGAGTCGTATATTGAAGGTTAGCACCTCATCACAGCAGCTAAAAACGACGCAA TCTTCTTCTATAAAAATCCCCGTAAAAAGCAATTTGATATCATTACATAGAGGTGAAACGAAGCTTCTATCCGAATTCAA TCAGCCATCATTACCTTCTACTCGTTCCATTCATACTGTTTTTAATCTACAACAAAATATGATCGATTCTGCTGCCTTAG CACTAAGGAACCTTGGCGGCGATCCCACAACACTAAAGCATTTATCTCGCCAGTTAGAAGCGGCTCATTTCAAAGCAGAC AGACCAGCTACCCCAGATGAATTAAAAGCAACAAAATCTCTTAGCAAAAATCTTATTAATTTAATAGCCAACCAGCTAAG AAAAATAGGCATCTCACACAAAGAAGCTATGAAAGAAGCAAAACTTGCCTTCAGTGAAGCTAGTAAACAACATCTTAATA ATAAGAAATGGACTACACTGGAAACTCAATTTGAACATAGTGGTAGAATGTATCATTGCACATCCATACCGGCAGCACAG ATGAAATTAGGTGCAGAGGATATCTTTCCGATTTCCTATCGGGATTACGGTGTGTGCAGTAAATCCACACAAGAAACCAT CCACTCCGTTAATATGTGGGTATCAGATATACGTGTCAAAAATGACAATGGGCAAGAACAGACACTATTTAAAGGATTAC GTCACGGCGTCTTATCGCCTTTTACATTGGAAAAAGGAACAATAGAACGTTTAGACGGTGCAAAAGCACGAGCACGTGAA GTTGTCACCGCCGCACTATTTACGAAAACAGATCTACTACAACAAGCATTAAAAGGAGAAACCGTTGAGTTACAGTTAGT CTCGACATCACTACTCACCGCATTTCAACAAGAAAGTGATATGTTGCACGATCAAATAGAGGCATGGAAAGCACTGTGTG CTGAGAAACCACTTACGTTATCTATACGCACCGAAGATGGCCATATGCAAAACGTCAAGGTAAAACTAGACGTCGCTGCC TTTAATTTTGGTGTCAACGAACTCGCTCTGAAACTTCCTTTAGGCCACAATCAAGCTGATAAGTGTAATGTGACAGCATT ACATCAACTCTTAGGAAATGACTTGCATCCTATGGCCAAACCCGGTGGTTGGGTAGGAGAATACTTGGCCAATAATCCCA AAAATGCTTCACATGTGCGCCTATTAAGCCAACAATTGAAAGAAATTTGGGCTGATAAAGCACATCATTACGATGGTGGT GAACCATACAAAGCTCCACAGCGCGTAGCAATGCTGGCCTATGAGATAGGTGCCATACCCTGTTGGAACTGCAAAAGTGG TAAGGACAGAACCGGAATGCTGGATGTCGAGTTAAAACGAGAAGCTGTAGCAATCCATCAAGGACGTGGCTTAAATGCGC CTGGCAGCCAACTGAAAAAAACAGATCAGAAGCTATTACAGCAATTACTTCTCCATAGTGGAAATCTGGAAATACAAGCC ATCAATACTGGTACTCCCGGCAATAAGGTGATGAAAAACGTTCCACTTATTAGTTTATCGTATAAGCAACGTATAGGAGA TTCTGAGACTTGGGAACAAGCTCAAGGATTATCATCTCTGTTGTAG Protein sequence : MVQYLFNTYYFNMKGEIMHIQVTKFPTPILQNIKHTQIAKFPTFLIKNIKHITSKISANRATLSRILKVSTSSQQLKTTQ SSSIKIPVKSNLISLHRGETKLLSEFNQPSLPSTRSIHTVFNLQQNMIDSAALALRNLGGDPTTLKHLSRQLEAAHFKAD RPATPDELKATKSLSKNLINLIANQLRKIGISHKEAMKEAKLAFSEASKQHLNNKKWTTLETQFEHSGRMYHCTSIPAAQ MKLGAEDIFPISYRDYGVCSKSTQETIHSVNMWVSDIRVKNDNGQEQTLFKGLRHGVLSPFTLEKGTIERLDGAKARARE VVTAALFTKTDLLQQALKGETVELQLVSTSLLTAFQQESDMLHDQIEAWKALCAEKPLTLSIRTEDGHMQNVKVKLDVAA FNFGVNELALKLPLGHNQADKCNVTALHQLLGNDLHPMAKPGGWVGEYLANNPKNASHVRLLSQQLKEIWADKAHHYDGG EPYKAPQRVAMLAYEIGAIPCWNCKSGKDRTGMLDVELKREAVAIHQGRGLNAPGSQLKKTDQKLLQQLLLHSGNLEIQA INTGTPGNKVMKNVPLISLSYKQRIGDSETWEQAQGLSSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sigD | NP_455588.1 | cell invasion protein | Virulence | SPI-5 | Protein | 2e-108 | 50 |
| sopB | YP_216030.1 | outer protein | Virulence | SPI-5 | Protein | 2e-108 | 50 |
| sopB | NP_460064.1 | secreted effector protein | Virulence | SPI-5 | Protein | 2e-108 | 50 |
| sopB | AAC33723.1 | SopB | Virulence | SPI-5 | Protein | 6e-105 | 48 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| PAU_01919 | YP_003040755.1 | Type III secretion system outer membrane | VFG0465 | Protein | 9e-109 | 50 |
| PAU_01919 | YP_003040755.1 | Type III secretion system outer membrane | VFG0992 | Protein | 2e-79 | 42 |
