Name : pdl1 (PAU_02483) Accession : YP_003041318.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : lipase, class 3 Function : - COG functional category : - COG ID : - EC number : - Position : 2833748 - 2835661 bp Length : 1914 bp Strand : - Note : - DNA sequence : ATGAGTACATTAGATCCGCGAGAATGTTTTGATTGTAGGATACTGAAACACTGGGTTGAATTTCAGTTAGTAGATGAACA AGGGAAACCTTTAGTCAATATGCCTTATAGCATGGTAAGTAGGGGACTCCCGGATCATGTGCGCCGGGGAAAGACAGATG GTTTCGGGGTGCTGAGGGAAGAAGACCTGTCAGCTTATCCAGTGAAATTGTATATTGATGCCCAATCGTTGGCCGATGAG ATGGAACAGCGCCCGTTGCGGGAAATACGAGGAGAAGAGGCGTCGGTAGTGAAGCCAAAAGCGGAAGCCGAAGGCCACCA ATATCACTATGTGACTATCGGGCAGATCAGTGATGGGTTGCCGTCGCTTGAAGGATGGGACCCCAAAGATATTCCACCAC CCTATCATTTTCCTAATCCGGAACCCAAAGGTTATCAGGTCCATCCGTTAAGTCGTCGGTATGTACTGGAAGTCTGTCCA TTCCGGGCCTGGGTTTTGCTGTTACATCACCAAAAAGAGTATTCCCTTGTGAATGCCTATAATCAGTGTTTGATGAGCGT GTTAGCTTACGCCGATGGGGATGTTGATGTTGAAGGTTCGGTTAAACATTTTTTTAACCGGCAAATGGTGGATGTTTCGA AGTTGCCTTATCAGGTGGAAAAAGCATCGGCAACACCGGTGGTTTATAATGTGCCGTTTAGTGAACGTTATACTCAGGTG GAGTTTATTGATTCACGGGCTGGGGATCATAAACAGAGTGATACCAAACTGTTTTATGTTGCCAGTAAGCAAGATGTGAT TATCAGTTGGCGAGGTACGGCGACTCTGGAGAATTACCTGACTGATGCCACCTTCCAGCCATTGGCTTTAAGCTGCGATG ATGACAAAGCGCTATGCAGTGGGTTTATCCATAGAGGTAAAGTGCACAAAGGATTTTGGGAAGCGTTTAATTTGGTTAGG GAGTTAAGTGTTCCCAGTGATAAAAGTAAACTAGTATTCGGCGATATCATTACACTAGCTCAGGGACGAAGATTGTTTGT CTGTGGTCATAGCTTGGGTGGTGCACTGGCATTACTGCACAGCGCACAACTGCAAAAACATAACCCTTGCCTCTACAGTT ACGGAATGCCGAGAACATTAACCCGCAGTGCGGTAGAGGAATTATCTTCCATTATCCACTATCGTCATGTTAATGAAGAT GATCCAATACCTTCGGTGCCCTTTGAGCAGGATATGGATAATAGATTTTTTAATTACTGGGCGTTGGCAGGCTATGAATG GGAAATCATGAAACAGGTGTCACCGTCACCGATTGTTAAAGCCATTAAACAAGCGACAGCCAGTAAAGAAATTTATCTGC ATCATGGTAAGGTTGTGCATTTTTTTCAAGCCAACAGTTGCCCAGAATGGCTGATTTCCGCCAGGAATGTCCCCTTTATA ACGGGTGTGACTGAAGAAATATTGAATAACACCACCAAGCTCTATTTAATTCCTGAATTAAACCCGGAAACAGAAAAGGA TTTTTCTCTGGCGGGTGAGCAGCAAAATGCGTTGTTTAATCAGCTCAGTCAACCAGAAAAAGATAAACTGTTTGTTGAAA ACAGAGGTGTTGATTTAAAAGGGGGATTTGGCTTTTCTAATCATAGCTCGTATAAATATGCGGGTTATATTGATAAGCGC CTCAGAGAGTTATGCGAACCGGATAAGATTACGGTCTATCAGGACAGTCAGCGTCAATTTAAGGCGAAAATGGATAATGA TAAGAGGCTTATTCCGGACAACATTTACTATCGTAATCTCTATTTTCTGGATATGGATAAACAGTTAATAACATCACTGA CCGTCAGCCAACAGGAAGAACAAGGCACACTGGCCTTACAACATTATTGCGATAAGAAGGAACTGTCAGTATGA Protein sequence : MSTLDPRECFDCRILKHWVEFQLVDEQGKPLVNMPYSMVSRGLPDHVRRGKTDGFGVLREEDLSAYPVKLYIDAQSLADE MEQRPLREIRGEEASVVKPKAEAEGHQYHYVTIGQISDGLPSLEGWDPKDIPPPYHFPNPEPKGYQVHPLSRRYVLEVCP FRAWVLLLHHQKEYSLVNAYNQCLMSVLAYADGDVDVEGSVKHFFNRQMVDVSKLPYQVEKASATPVVYNVPFSERYTQV EFIDSRAGDHKQSDTKLFYVASKQDVIISWRGTATLENYLTDATFQPLALSCDDDKALCSGFIHRGKVHKGFWEAFNLVR ELSVPSDKSKLVFGDIITLAQGRRLFVCGHSLGGALALLHSAQLQKHNPCLYSYGMPRTLTRSAVEELSSIIHYRHVNED DPIPSVPFEQDMDNRFFNYWALAGYEWEIMKQVSPSPIVKAIKQATASKEIYLHHGKVVHFFQANSCPEWLISARNVPFI TGVTEEILNNTTKLYLIPELNPETEKDFSLAGEQQNALFNQLSQPEKDKLFVENRGVDLKGGFGFSNHSSYKYAGYIDKR LRELCEPDKITVYQDSQRQFKAKMDNDKRLIPDNIYYRNLYFLDMDKQLITSLTVSQQEEQGTLALQHYCDKKELSV |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
pdl1 | AAL18491.1 | Pdl1 | Not tested | tcd island | Protein | 0.0 | 83 |
pdl2 | AAO17208.1 | Pdl2 | Not tested | tcd island | Protein | 0.0 | 78 |