Gene Information

Name : pdl1 (PAU_02483)
Accession : YP_003041318.1
Strain : Photorhabdus asymbiotica ATCC 43949
Genome accession: NC_012962
Putative virulence/resistance : Unknown
Product : lipase, class 3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2833748 - 2835661 bp
Length : 1914 bp
Strand : -
Note : -

DNA sequence :
ATGAGTACATTAGATCCGCGAGAATGTTTTGATTGTAGGATACTGAAACACTGGGTTGAATTTCAGTTAGTAGATGAACA
AGGGAAACCTTTAGTCAATATGCCTTATAGCATGGTAAGTAGGGGACTCCCGGATCATGTGCGCCGGGGAAAGACAGATG
GTTTCGGGGTGCTGAGGGAAGAAGACCTGTCAGCTTATCCAGTGAAATTGTATATTGATGCCCAATCGTTGGCCGATGAG
ATGGAACAGCGCCCGTTGCGGGAAATACGAGGAGAAGAGGCGTCGGTAGTGAAGCCAAAAGCGGAAGCCGAAGGCCACCA
ATATCACTATGTGACTATCGGGCAGATCAGTGATGGGTTGCCGTCGCTTGAAGGATGGGACCCCAAAGATATTCCACCAC
CCTATCATTTTCCTAATCCGGAACCCAAAGGTTATCAGGTCCATCCGTTAAGTCGTCGGTATGTACTGGAAGTCTGTCCA
TTCCGGGCCTGGGTTTTGCTGTTACATCACCAAAAAGAGTATTCCCTTGTGAATGCCTATAATCAGTGTTTGATGAGCGT
GTTAGCTTACGCCGATGGGGATGTTGATGTTGAAGGTTCGGTTAAACATTTTTTTAACCGGCAAATGGTGGATGTTTCGA
AGTTGCCTTATCAGGTGGAAAAAGCATCGGCAACACCGGTGGTTTATAATGTGCCGTTTAGTGAACGTTATACTCAGGTG
GAGTTTATTGATTCACGGGCTGGGGATCATAAACAGAGTGATACCAAACTGTTTTATGTTGCCAGTAAGCAAGATGTGAT
TATCAGTTGGCGAGGTACGGCGACTCTGGAGAATTACCTGACTGATGCCACCTTCCAGCCATTGGCTTTAAGCTGCGATG
ATGACAAAGCGCTATGCAGTGGGTTTATCCATAGAGGTAAAGTGCACAAAGGATTTTGGGAAGCGTTTAATTTGGTTAGG
GAGTTAAGTGTTCCCAGTGATAAAAGTAAACTAGTATTCGGCGATATCATTACACTAGCTCAGGGACGAAGATTGTTTGT
CTGTGGTCATAGCTTGGGTGGTGCACTGGCATTACTGCACAGCGCACAACTGCAAAAACATAACCCTTGCCTCTACAGTT
ACGGAATGCCGAGAACATTAACCCGCAGTGCGGTAGAGGAATTATCTTCCATTATCCACTATCGTCATGTTAATGAAGAT
GATCCAATACCTTCGGTGCCCTTTGAGCAGGATATGGATAATAGATTTTTTAATTACTGGGCGTTGGCAGGCTATGAATG
GGAAATCATGAAACAGGTGTCACCGTCACCGATTGTTAAAGCCATTAAACAAGCGACAGCCAGTAAAGAAATTTATCTGC
ATCATGGTAAGGTTGTGCATTTTTTTCAAGCCAACAGTTGCCCAGAATGGCTGATTTCCGCCAGGAATGTCCCCTTTATA
ACGGGTGTGACTGAAGAAATATTGAATAACACCACCAAGCTCTATTTAATTCCTGAATTAAACCCGGAAACAGAAAAGGA
TTTTTCTCTGGCGGGTGAGCAGCAAAATGCGTTGTTTAATCAGCTCAGTCAACCAGAAAAAGATAAACTGTTTGTTGAAA
ACAGAGGTGTTGATTTAAAAGGGGGATTTGGCTTTTCTAATCATAGCTCGTATAAATATGCGGGTTATATTGATAAGCGC
CTCAGAGAGTTATGCGAACCGGATAAGATTACGGTCTATCAGGACAGTCAGCGTCAATTTAAGGCGAAAATGGATAATGA
TAAGAGGCTTATTCCGGACAACATTTACTATCGTAATCTCTATTTTCTGGATATGGATAAACAGTTAATAACATCACTGA
CCGTCAGCCAACAGGAAGAACAAGGCACACTGGCCTTACAACATTATTGCGATAAGAAGGAACTGTCAGTATGA

Protein sequence :
MSTLDPRECFDCRILKHWVEFQLVDEQGKPLVNMPYSMVSRGLPDHVRRGKTDGFGVLREEDLSAYPVKLYIDAQSLADE
MEQRPLREIRGEEASVVKPKAEAEGHQYHYVTIGQISDGLPSLEGWDPKDIPPPYHFPNPEPKGYQVHPLSRRYVLEVCP
FRAWVLLLHHQKEYSLVNAYNQCLMSVLAYADGDVDVEGSVKHFFNRQMVDVSKLPYQVEKASATPVVYNVPFSERYTQV
EFIDSRAGDHKQSDTKLFYVASKQDVIISWRGTATLENYLTDATFQPLALSCDDDKALCSGFIHRGKVHKGFWEAFNLVR
ELSVPSDKSKLVFGDIITLAQGRRLFVCGHSLGGALALLHSAQLQKHNPCLYSYGMPRTLTRSAVEELSSIIHYRHVNED
DPIPSVPFEQDMDNRFFNYWALAGYEWEIMKQVSPSPIVKAIKQATASKEIYLHHGKVVHFFQANSCPEWLISARNVPFI
TGVTEEILNNTTKLYLIPELNPETEKDFSLAGEQQNALFNQLSQPEKDKLFVENRGVDLKGGFGFSNHSSYKYAGYIDKR
LRELCEPDKITVYQDSQRQFKAKMDNDKRLIPDNIYYRNLYFLDMDKQLITSLTVSQQEEQGTLALQHYCDKKELSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pdl1 AAL18491.1 Pdl1 Not tested tcd island Protein 0.0 83
pdl2 AAO17208.1 Pdl2 Not tested tcd island Protein 0.0 78