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Name : rtxB (PAU_03077) Accession : YP_003041907.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Virulence Product : RTX toxin ABC transporter protein Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3641501 - 3643606 bp Length : 2106 bp Strand : + Note : - DNA sequence : ATGAATGAGATTGAAAAATTAACCCTATCATCATTAAAGTTAATATTGATGATATGTAATGGAAAAAACAATATCACTGA TATTGATCACTTAAAAAACGCTAATTGTTACCAATCTTATATAAGAGATATAGAGAAAAAATTTAACTTATCTCTCGTCA ATAAGCAATCTGCCAGAAAAAAACACGATGATATACCATTACCCGCAATCTTGTTTGATAATAATGGCCTACCTTTTGTT TTAGCCAAATCGAATAAAGAAAACGCACTCATCCAAAAGGTAAATAAAGAAACCCCAGAAATATGGCCTGCTAAAAAACT TATGGAAGAATGGAATGGCAAATGGATTAAGATAAAACAAAAACAATCTAAATTTGATATTAGTTGGTTTATTCCAGAGT TTTTGGCACAAAAGAAAAACCTAGGTGAAATATTACTGTTTTCTTTTGTACTACAAGTTCTTGCACTCATTTCACCCTTA GTCATTCAGGTCGTTATGGATAAGGTATTAATCCATCAGGCATTATCAACCCTTGATGTATTAATCTTTGGTTTAATTAT CGCCGGAATAATCGAAGTGATTTTACGAGGATTACGCGAATATCAATACGCTCATACCGCAAACCGTATCGATATCAAAT TAGGATTAAAGCTGGTTCGGCATCTATTTGGCCTGCCTTTACTCTTTTTTAAATCCCGTCAAGTAGGCGCGATTGTTACA CGGGTTCGTGAACTGGATACCATCAGGGAGTTTCTCACTGGTTCAATGTTCACCTTATCCGTCGATATGCTGTTTATGTT TGTTTTCATCTACGTGATGAGCCTGTTATCCAGTACGCTAACCTGGGTTTTTATCGCAACAATTCCTTTTTATGCCATTC TGGCATGGTGGCTAACACCTCGCATGGAAAAGGCCGTTGAAGAACAATTCACTCATGCAGCAATCAATACCTCTTTTCTG ACCGAAACGGTTTCCGGTTCCGAAACACTTAAAAGCCTGGCAGTAGAACCAAGATTTGTTCGCCGCTGGGATAGCCAAAC CGAGCAGATGATTGATACCAGTTACGCAGTACAGCAACTTGGTAATCGCTCAAATCATATTGTTATGCTACTGCAAAAAG TCACCAATGCCGCAATTCTCTGGTTAGGCGCATCAGAAGTTTTATCCCTGCAAATGACACTGGGTCAGTTGATCGCCTTC AATATGATGGTAAACCATACTTCCCAACCATTAGCCCGGCTGGTGGAACTTTGGGGACAATTTATCAGAACACGGGTAGC TGTAGATAAATTAGGCGATATGTTAAACCTACCAACCGAGCAGCAGTCCGGACAACAACAAGTCGCTCTGCAAGGGGCAA TCTCATTTAACCAGGTTGTCTTTCGTTATCAACCCGATATTCCTCCAACCATTAAAGGATTTACCCTTGATATAAGAGCC GGAGAAACCATTGGTATTGTGGGCACCTCCGGTTCAGGCAAAAGTACGCTGGCACGTTTATTACTCCGCCTTTATTCGCC GGAAACAGGTGCAATCACCTTAGATGGAATTCCATTGCAAAATATAGGTATCGAAACACTCAGACAGCAAGTTGGCGTTG TTCTACAAGAAAATTTCTTATTTAACAAAACAGTATATGAAAATATTGCCCAGTCAAAACCCGATATTAACCTGGAATCA GTGATTAAAGTTGCCAAACTGGCAGGTGCTCATGACTTCATTCTCAGGCTACCAATGGGATATGACACCATCATAGCAGA AGGCGGGCAATCCTTATCTGGCGGTCAACGTCAGAGGCTTGCTATTGCTCGGACTATACTTGCAGACCCCAAAATTCTCA TTCTCGATGAAGCAACCAGTGCGCTTGATGATGAATCACAATCACTCATTCAATCAAATATGGCAGAAATTGCACAGGGC AGAACCGTCATCACTATCGCACACCGGCTTTCAACCGTGCGTAATTGTGATCGCATTATTGTTCTTAATCAGGGGGAAAT GATTGAGCAAGGTTCTCATGAGCAACTGCTTAAACACGGCAAGCAGTATCGGAAGCTCTGGCAACTGCAACAGGAATTGA AACAGGAGGTGCCTTATCATGATTAA Protein sequence : MNEIEKLTLSSLKLILMICNGKNNITDIDHLKNANCYQSYIRDIEKKFNLSLVNKQSARKKHDDIPLPAILFDNNGLPFV LAKSNKENALIQKVNKETPEIWPAKKLMEEWNGKWIKIKQKQSKFDISWFIPEFLAQKKNLGEILLFSFVLQVLALISPL VIQVVMDKVLIHQALSTLDVLIFGLIIAGIIEVILRGLREYQYAHTANRIDIKLGLKLVRHLFGLPLLFFKSRQVGAIVT RVRELDTIREFLTGSMFTLSVDMLFMFVFIYVMSLLSSTLTWVFIATIPFYAILAWWLTPRMEKAVEEQFTHAAINTSFL TETVSGSETLKSLAVEPRFVRRWDSQTEQMIDTSYAVQQLGNRSNHIVMLLQKVTNAAILWLGASEVLSLQMTLGQLIAF NMMVNHTSQPLARLVELWGQFIRTRVAVDKLGDMLNLPTEQQSGQQQVALQGAISFNQVVFRYQPDIPPTIKGFTLDIRA GETIGIVGTSGSGKSTLARLLLRLYSPETGAITLDGIPLQNIGIETLRQQVGVVLQENFLFNKTVYENIAQSKPDINLES VIKVAKLAGAHDFILRLPMGYDTIIAEGGQSLSGGQRQRLAIARTILADPKILILDEATSALDDESQSLIQSNMAEIAQG RTVITIAHRLSTVRNCDRIIVLNQGEMIEQGSHEQLLKHGKQYRKLWQLQQELKQEVPYHD |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hlyB | NP_755448.1 | hemolysin B | Virulence | PAI I CFT073 | Protein | 7e-119 | 44 |
| hlyB | CAD33760.1 | hemolysin B | Virulence | PAI I 536 | Protein | 6e-119 | 44 |
| hlyB | CAD42038.1 | HlyB protein | Virulence | PAI II 536 | Protein | 6e-119 | 44 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| rtxB | YP_003041907.1 | RTX toxin ABC transporter protein | VFG1269 | Protein | 8e-124 | 44 |
| rtxB | YP_003041907.1 | RTX toxin ABC transporter protein | VFG1501 | Protein | 3e-119 | 44 |
| rtxB | YP_003041907.1 | RTX toxin ABC transporter protein | VFG0907 | Protein | 3e-119 | 44 |
| rtxB | YP_003041907.1 | RTX toxin ABC transporter protein | VFG1557 | Protein | 3e-119 | 44 |
| rtxB | YP_003041907.1 | RTX toxin ABC transporter protein | VFG0841 | Protein | 3e-109 | 44 |
