|
Name : PAU_03488 (PAU_03488) Accession : YP_003042318.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : Protein-export membrane protein secD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 4086327 - 4088174 bp Length : 1848 bp Strand : - Note : - DNA sequence : GTGCTAAACCGTTATCCTTTGTGGAAGTATCTGATGCTGATCGCTGCGATCCTCATCGGTTTGCTTTATGCACTTCCCAA CCTTTATGGTGAGGATCCGGCTGTACAAATCACTGGCGCGCGAGGCATTGCCGCCAGTGAGCGAACGCTGGACCAAGTCC GTAATGTTTTAGAGAAAGATCAAATCACGAGTAAATCTATTGTACTGGAAAATGGTGCAATTCTTGCTCGTTTCAATAAT CCTGATATTCAGCTTCGTGCCCGTGAAATATTGATGTCCGCATTAGGCGATCAATATGTGGTGGCATTGAATCTGGCACC AGCAACGCCAACTTGGCTGAGTAAGCTTGGTGCAGAGCCAATGAAGCTGGGCCTTGACCTGCGTGGTGGTGTGCACTTCC TGATGGAAGTGGATATGGAGACCGCGTTAGGCAAACTGCAAGAGCAGAATATTGATGGCCTGCGTACTGATTTACGTGAA AAAGGCATTCCTTACTCCACTATCCGCAAAGCTGATAATTACGGTGTAGAAATCCGCTTCCGTGATGAAAAAGCTCGCTC TGATGCGGAGAGCTATCTTACGGGTCGTCACCGTGATTTAGTGTTCAGTGTTGGAGTAAACAATACCCTGAAAGCGGTGA TGAGTGATGAGCGTCAGCGCGAAGCTCGTTCTTATGCAGTGCAACAGAACATTACCATTCTGCGTAACCGTGTTAACCAG CTGGGTGTTGCTGAACCGTTGGTTCAGCGTCAAGGCGCAGATCGTATCGTGGTTGAGTTACCGGGTATTCAGGATACTGC CCGCGCTAAAGAAATTCTTGGTGCGACAGCGACATTGGAATTCCGTTTAGTTAATTCTAGCGTTGATGCTACAGCGGCTG AATCAGGCCGTGTACCGGGTGATTCTGAGGTGAAAAATACCCGTGATGGTAGTCCGGTTGTGTTATATAAGCGCGTTATT CTGACCGGTGATCACATTACAGATTCGACCTCTGGTACGGATGAATACGGACAGCCAGAGGTGAATATTTCACTAGACAG TGCTGGTGGTACAGCGATGTCTAATTTCACTAAAGATAATGTTGGTAAACCAATGGCAACGCTGTTTGTGGAATATAAAG ACAGCGGTAAGAAAGATGCTAATGGTCGGGCTGTGTTAGTCAAAAATGAAGAAGTGATTAACATTGCTAATATCCAGACC CGTTTGGGGAATAATTTCCGTATTACGGGTATTTCCAATGCAACTGAAGCCCGTCAGTTATCTTTACTGCTGCGTGCCGG TGCTTTGATTGCACCGATTCAGATTGTGGAAGAACGCACTATAGGGCCAACTCTTGGCTTGCAAAACATTGAGCAAGGTT TGGAAGCTTGTTTGTGGGGATTAATTGCATCAATCCTGTTTATGGTGATTTACTATCGCAAATTTGGTTTGATTGCGAGT AGTGCACTGTTGGCTAACCTGGTGTTGATTGTTGGTGTGATGTCCCTATTACCGGGGGCTACGTTAACCATGCCGGGAAT TGCAGGGATTGTTCTGACATTGGCGGTGGCAGTTGATGCTAACGTATTGATAAACGAACGTATTAAAGAAGAATTGCGTA ACGGTCGTACTATACAGCAAGCGATACATGAAGGTTATAAAGGTGCTTTCTCCAGTATTGTCGATGCTAACCTGACCACG TTGATTACTGCTGTCATTCTTTACGCTGTTGGTACCGGGTCAATTAAAGGCTTTGCGATAACAACGTCAATTGGTGTCGC CACTTCTATGTTCACTGCTATTGTCGGTACTCGGGCTATCGTGAACCTGCTATATGGCGGTAAGCGCATTAAGAAGCTGT CAATTTAA Protein sequence : MLNRYPLWKYLMLIAAILIGLLYALPNLYGEDPAVQITGARGIAASERTLDQVRNVLEKDQITSKSIVLENGAILARFNN PDIQLRAREILMSALGDQYVVALNLAPATPTWLSKLGAEPMKLGLDLRGGVHFLMEVDMETALGKLQEQNIDGLRTDLRE KGIPYSTIRKADNYGVEIRFRDEKARSDAESYLTGRHRDLVFSVGVNNTLKAVMSDERQREARSYAVQQNITILRNRVNQ LGVAEPLVQRQGADRIVVELPGIQDTARAKEILGATATLEFRLVNSSVDATAAESGRVPGDSEVKNTRDGSPVVLYKRVI LTGDHITDSTSGTDEYGQPEVNISLDSAGGTAMSNFTKDNVGKPMATLFVEYKDSGKKDANGRAVLVKNEEVINIANIQT RLGNNFRITGISNATEARQLSLLLRAGALIAPIQIVEERTIGPTLGLQNIEQGLEACLWGLIASILFMVIYYRKFGLIAS SALLANLVLIVGVMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELRNGRTIQQAIHEGYKGAFSSIVDANLTT LITAVILYAVGTGSIKGFAITTSIGVATSMFTAIVGTRAIVNLLYGGKRIKKLSI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 8e-120 | 47 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 47 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 47 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 3e-120 | 47 |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 2e-120 | 47 |
