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Name : rhs-core (PAU_00967) Accession : YP_003039804.1 Strain : Photorhabdus asymbiotica ATCC 43949 Genome accession: NC_012962 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG3209 EC number : - Position : 1105653 - 1110008 bp Length : 4356 bp Strand : - Note : - DNA sequence : ATGTCACTTGGTGATGAAATTGTCACCCGAATTGCCCGGGTCGGCGCCCGACACGCTGCGCCCGTTTCTCCCCCACAGGG TACGCCCGGTCCGGCTGCTGCCCGGAAAGACGACCCGATTAAACATGCCAGCTTCCTTGGTGCGCTGGCCGGGGCCATCA CCGGCGCCCTGATAAGCGCTGCGGTCTTTGCCGCAGCCGCTGCCGTGGTCGTCGGCACCGGCGGTTTAGCCACCGTTGCG GTAATTGCACTGGGCACTGCCGGCACACTGGCTCTGGGGAATGTTATCAGTGCTGCCAGTTCCGCGGTCACCCGTATGGT GGACAGTATTGGACCGCCCGCTGGCACACTAATAAGCGGCTCGCCGAATGTGTCTGTCGAAGGCAAACCCGCGGCCAGAG CCACCGTCGATACTGCCGGCTGTACGAAACACCCTGCCGCACCGTCCCTGATTGCCCAGGGCAGTGAAACGGTGTTCATC AACGGCTACCCGGCGGCCCGGGTAGATGACAAGCTGGTCTGCGGTGCCACCATCAAAGCCGGGGCCGGAACCGTGTTTAT CGGTTCCGGTCAGGGCACCTATCTGGACATTGAGGAAGAATTCTCCGCCTGGGAGCGCGCGATTCTGATAGCGGTGGAAT TTCTGGTACCACCGTCCCGGGGCACCATTAAGGGGCTCGGTAAACTGTTCACTAAAACCGGTCGTCAGGCGGTACTGAAC GGGGCGAAGACCGGTGCCCGGCATGTCGGAAAAATCGTGTCTATGGGCACGATTTCCTGTGCTAAAACCGCCTTTAAAGA AACCCAGGGTGCAAAACGTTACTGGGCAGCGACCAAAAAATTCTTCACCGGCGACCCGATTGATGTCACCACCGGCCAGC TGTTCGACCAGCGCACAGATATCACCCTCGGTCAGACCCTGCCGCTGGTGTTTTTACGCAGCTGGGCCCCCGGAGAACAG GGCCTGCTGGGACCGGGCTGGACCGACAGCTTTTCCGAATGCGTCCGGGTCACCGGCGACCGGGTGGAAATCAGCACCAC CGAAGGGGCCTCACTCTATTTTGCCTTACCCGCCACCTGTACACACAGTATCAACCCGGATCACCCGGATTTTACCCTGA GCCGGGGCACATCGGGATACATCCTCAGCCACCGAGATTCCCCAGTCCGGAAATATTTTACCCTGCCAGTACCGGCTCCC GCCGGTGACACACAGAGCTGGCTGCTCACCGAACACCGGGACGTGTATGATAACCGGCTGCATTTTGTCTATAACGACCG CTGTCAGCTGACCGAAGTCATCCACAGTGACGGACCGGTGCTGACACTGTGCTATAACCTGTGCGGGCAGCTGACGGAGA TTATCCGCACCGATGAAGGGTTACAGGAAGTCATGGCCCGCTATCACTACCATGATAATGGCCGGCTGGCGGAAGCAGAC AGCACTCAGCAATTTCACCTGTACTATGAATACAACGCGCAGGGCCTGATAAGCCGCTGGTCTGACGGCGACCAGACCTG GGTGGATTACCTCTACGATGAACAGGGGCGCTGTACTGACAGTGTGGGGGCCGGCGGTTTTTACCCGGTCCACCTGGACT ATGCCCCCGGCATCACCCGCTCTGCGACACCACAGGGGCACACCACCACCTGGTATTACAATGACCAGCAGCAGGTCACT GAAGTCCACACCCCGGGCGGCAGTATCACCCGTTATGACTATGATAACCAGGGCAATCTGATACAACAGACGTTACCGAT GGGAGAAATCCTGACCCTGACCTACCTGGCTGATACCGGTCGGGTGACTGCATTCACTGATGCAGCCGGGGGGGTCTGGC AATACAGCTATGATGCCGACACCCTGCAACTGACCGGCATGACTGACCCGCTGCACCGCACCTGGCTGCAACTGTATGAT GAACGGGGCCAGCCAAAAGGATTTATTGCCCCGGACGGTCGGAAAACCACCCTGACCCGTAATGCTTTCGGGCTGGTGAC CGAGGAAGAAGACACCGACGGTAACCGCCGTACTCAGGAATATGATACCCATCAGCGGCTGGTCAGACTGTTTGACGAGG AAAACCGCACCGTCAGCCTCGGCTACGACAGTCAGGACCGGCTGCGCAGCCTGACCGCCGCCGGAGCACTGTGGCGCTGG CGTTACGACCGGCATCACCGGGTGGCCGTCAGCGACCGGCCTGATAACAATCTGGAGCATTTTCACCATGACCGGCACGG TAACTTAACCTGCTGGACCGACGCGCGCGGGGTGGCATGGCAGGTGGAATATGGTCCGTTTGACCTGCCGATAGCGCGGC ATGATGGCGAAGGACACCGCTGGCAGTACCGCTATGATGCTGACACGCTGCAACTGACTGAAGTGATTAACCCACAGGGG GAAAGTTATACCTACACCCTCGATGCAGATGGCCGGGTGGTTACTGAGCAGGATTATGCCGGCACCTGCTGGCACTACCG TTATGACTTATCAGGCAACTGTATTGAGAAGCGGGACGGGGAAGAGAATGTGACCCGCTATGACTATGACGCGGCACACC GCCTCACGGCCCTGCATCCTCCGGAAGGCACGACCCGTTATCATTACGATATTGTGGGACGACTGCTGAGCGTCGAGTCA CCGGACAACACGCTGGCTTTTGAATATGATGAACAGGACCGGATAGTCCGGGAAATCCAGCCATACGGAGAAATTCAACG CCACTACCCGGATAACCGTACCGTAGAGCGACTGCTGCTGACCGGTGAAACCAAACCCGCAGAAGGACCGTCCCGGTTCG CCGGACAGACTCACCCGGAACACTGGCAGAGCCGGATGCAGGTTAACCGAGCCGGGGAGCTGACCGGACTGACGCTGGAC GGCCTGTTACCTCTGACGGTGGAACGGGACGAAGCCGGGCGGGACACGGGCCGTCACACCGAAAGCGGTTTCATCCTGCG CCAGCAGTATAACCTGATGGGCCTGTTGACAGCCCAGCGTGCCGGCTGTAACCCCCATTTTTTCCGGCAGACTGACCTGC CCGATATTCCGGCCCCCACCTTTGCGGGTCTGGTACGTCAGTATGAGTATGATGCCGCCCTGAACCTGACGGCGGCCAAC GATGACAGGCAGCCACTACACTATCTTCTTAACGGAAATGGTCAGGTGGTATCAGTTGGTGACGGACGAAACCTGCGTGA GCATTATCAGTATGACGCCAGCGGTTACCCCTCCCGGCGGTTCGACGGGATGCAGGAAATCGGGGGGGAAACGCTGTATC AGGAAGGTCACCGTCTGAACTGGATTGGCCCGCACCGGTTTGTGTACGACCGGGCCGGTCGTATGAAGGAGAAACAGCGT TTAGAAGAAGGTTACCGTCCGGCGCTGACCCGATACCGCTGGAACAGCCAGAATCAGCTGACCGGCCTCATCACCCCGGA CGGTATCCGGTGGGAATATCGCTATGATGCTTTTGGACGGCGGACCGAAAAGCGCTGTACCCAGACCGGTAAACTGACCA CGTATCTATGGGACGGCGATGTGCCGGCGGAAATCCGGGAATATCAGCACGGCCGGCTGAAAATGGTCCGCCATCTGGTG TTTGACGGCTGGGAGCTGATAGCGCAGCAGACGCGGGCGGTTACCCTCAATCTGGACAACCGGGTGGAACTGATGGCCGG GGCAGTGCAGACCCAGTATGCGGTCAGCGCCCCGACCGGGGAACCGCTGGCGCTGTTCGACCCGACGGGGAAACGGGTCT GGCGGCGGCCGAAACAGTCCCTGTACGGGCTGCGGCTGGGCGGACAGGGAGAAAATCCGCAACTCGATCCGGGCCTCCGG TTTGCCGGGCAACTTTTTGATGAGGAAAGTGGTTTATGCTATAACCGGTTCCGTTATTATTTGCCGGAAGGCTGTTGTTA TCTCAGCCCTGACCCGCTCGGGCTGGAAGGGGGTCCGAATCCCTATTCGTATGTTCATAACCCGGCGAACTGGATTGACC CATTCGGGTTAGCAGCTTGTCCAACACAAAAATACGAAGTTAGTACATTCGATGATTTACAGAGACGTTCTAAGGTGGGT GATAAATTAGATATCCACCATGCGGCTCAAAAACATCCTGCGGGGCAGGTAATTACTGGTTATGATCCTAAAGTAGCTCC ATCAATAGCTCTCCCTAGAGGAGAACATAAACTGATTCCTACTATGAAAGGACCGTATACGGGATCGGCTAGAGATTTAT TGGCAAAAGATATTAGAGATTTGCGCAATTATACTAATGCCCCTCCTTCAGCAATAAAAGATTTGCTCAATTTAAATAAA GAAATGTATCCAGAAGCCTTCACTAAAATAAGGTAA Protein sequence : MSLGDEIVTRIARVGARHAAPVSPPQGTPGPAAARKDDPIKHASFLGALAGAITGALISAAVFAAAAAVVVGTGGLATVA VIALGTAGTLALGNVISAASSAVTRMVDSIGPPAGTLISGSPNVSVEGKPAARATVDTAGCTKHPAAPSLIAQGSETVFI NGYPAARVDDKLVCGATIKAGAGTVFIGSGQGTYLDIEEEFSAWERAILIAVEFLVPPSRGTIKGLGKLFTKTGRQAVLN GAKTGARHVGKIVSMGTISCAKTAFKETQGAKRYWAATKKFFTGDPIDVTTGQLFDQRTDITLGQTLPLVFLRSWAPGEQ GLLGPGWTDSFSECVRVTGDRVEISTTEGASLYFALPATCTHSINPDHPDFTLSRGTSGYILSHRDSPVRKYFTLPVPAP AGDTQSWLLTEHRDVYDNRLHFVYNDRCQLTEVIHSDGPVLTLCYNLCGQLTEIIRTDEGLQEVMARYHYHDNGRLAEAD STQQFHLYYEYNAQGLISRWSDGDQTWVDYLYDEQGRCTDSVGAGGFYPVHLDYAPGITRSATPQGHTTTWYYNDQQQVT EVHTPGGSITRYDYDNQGNLIQQTLPMGEILTLTYLADTGRVTAFTDAAGGVWQYSYDADTLQLTGMTDPLHRTWLQLYD ERGQPKGFIAPDGRKTTLTRNAFGLVTEEEDTDGNRRTQEYDTHQRLVRLFDEENRTVSLGYDSQDRLRSLTAAGALWRW RYDRHHRVAVSDRPDNNLEHFHHDRHGNLTCWTDARGVAWQVEYGPFDLPIARHDGEGHRWQYRYDADTLQLTEVINPQG ESYTYTLDADGRVVTEQDYAGTCWHYRYDLSGNCIEKRDGEENVTRYDYDAAHRLTALHPPEGTTRYHYDIVGRLLSVES PDNTLAFEYDEQDRIVREIQPYGEIQRHYPDNRTVERLLLTGETKPAEGPSRFAGQTHPEHWQSRMQVNRAGELTGLTLD GLLPLTVERDEAGRDTGRHTESGFILRQQYNLMGLLTAQRAGCNPHFFRQTDLPDIPAPTFAGLVRQYEYDAALNLTAAN DDRQPLHYLLNGNGQVVSVGDGRNLREHYQYDASGYPSRRFDGMQEIGGETLYQEGHRLNWIGPHRFVYDRAGRMKEKQR LEEGYRPALTRYRWNSQNQLTGLITPDGIRWEYRYDAFGRRTEKRCTQTGKLTTYLWDGDVPAEIREYQHGRLKMVRHLV FDGWELIAQQTRAVTLNLDNRVELMAGAVQTQYAVSAPTGEPLALFDPTGKRVWRRPKQSLYGLRLGGQGENPQLDPGLR FAGQLFDEESGLCYNRFRYYLPEGCCYLSPDPLGLEGGPNPYSYVHNPANWIDPFGLAACPTQKYEVSTFDDLQRRSKVG DKLDIHHAAQKHPAGQVITGYDPKVAPSIALPRGEHKLIPTMKGPYTGSARDLLAKDIRDLRNYTNAPPSAIKDLLNLNK EMYPEAFTKIR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rhs-core | AAN64198.1 | Rhs | Not tested | macrophage toxin pathogenicity island | Protein | 0.0 | 78 |
