Gene Information

Name : Msip34_1220 (Msip34_1220)
Accession : YP_003050993.1
Strain : Methylovorus glucosetrophus SIP3-4
Genome accession: NC_012969
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1299955 - 1300674 bp
Length : 720 bp
Strand : -
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dar:Daro_1167 ABC transporter related

DNA sequence : 
ATGCCTGGCCATGTGATCGAGGTAAAAAACCTCTACAAGGATTACCAGACCGCTGCCGGAAAATTCCCGGTACTGAAGGA
GGTTAACCTGGAAATAGATGCAGGCGACTTTGTGGCCATCATGGGCCCTTCAGGCTCCGGCAAATCCACCTTCATGAATA
TCCTGGGCTGCCTGGATCAACCCAGCAGCGGCGAATACATGTTAAATGACCAGCCGGTGGCGCGCCTGCAGGGGGATCGT
CTGGCAAAAGTGCGCAACCAGACCATAGGTTTTGTTTTCCAGGGCTTCAATCTGCTGGCACGCTCCAGCCTGCTGGACAA
TGTCGCCCTGCCCCTGGTCTACGCCGGAATAGACAAACCCAAGCGGCATGCCCGCGCCCGGGTGTTGCTTGAAAAAGTTG
GCCTGGCGAATCACGTGAACTCGCATCCCAACCAGATTTCCGGTGGCCAGCAGCAACGCGTCGCCATCGCACGCGCCCTG
ATCAATCGCCCCAGCCTGATTTTGGCTGATGAACCCACCGGCAACCTCGACAGCAAAACCAGTGAAGAAATCATGGCTTT
GTTTGGCGAGCTTAACCGCGAAGGCATTACCATCGTACTGGTCACCCATGAGCCCGACATTGCCGAGCACGCCAGCCGCC
AGGTGCGATTTCTGGATGGCAAGATTGTGGAAGACACCCGGACAGCGCCGATTGCCGTGAAAGGAGCACCTCATGTTTAG

Protein sequence : 
MPGHVIEVKNLYKDYQTAAGKFPVLKEVNLEIDAGDFVAIMGPSGSGKSTFMNILGCLDQPSSGEYMLNDQPVARLQGDR
LAKVRNQTIGFVFQGFNLLARSSLLDNVALPLVYAGIDKPKRHARARVLLEKVGLANHVNSHPNQISGGQQQRVAIARAL
INRPSLILADEPTGNLDSKTSEEIMALFGELNREGITIVLVTHEPDIAEHASRQVRFLDGKIVEDTRTAPIAVKGAPHV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-33 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 6e-32 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Msip34_1220 YP_003050993.1 ABC transporter-like protein NC_012469.1.7686878. Protein 1e-58 56
Msip34_1220 YP_003050993.1 ABC transporter-like protein NC_008702.1.4606598. Protein 8e-45 45
Msip34_1220 YP_003050993.1 ABC transporter-like protein CP001581.1.gene598.p Protein 1e-36 41
Msip34_1220 YP_003050993.1 ABC transporter-like protein CP001581.1.gene798.p Protein 1e-34 41