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Name : Msip34_2233 (Msip34_2233) Accession : YP_003052002.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2361924 - 2363753 bp Length : 1830 bp Strand : + Note : TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: mfa:Mfla_0512 protein-export membrane protein SecD DNA sequence : ATGAATCGTTACCCCTTATGGAAATACATACTCGTGCTGATCACCCTGGTGCTCGGCGTAGTGTATTCGCTGCCCAATCT GTTTGGTGAGTCACCAGCCGTCCAGGTATCCACCGCCAAGAGTTCCGCGAAACTCGACCCGGCATTGCTGGGCCAGGTGG AAGATATCCTGAAGCAGGAAAAAATCACCTATGAAGCGGTGTTTCTTGACACGAATGGCGTCAAGGTACGATTTGAAAAT GCGGACACGCAAATCAATGCCAAGGATGTGCTGCAAGGTAAGCTGGGCAAGGATTACGTCGTTGCACTCAATCTGATCTC GCGCTCACCTTCCTGGCTGCGCAGCATCGGCGCGCTGCCCATGTATCTGGGTCTGGACTTGCGCGGCGGCGTTCACTTCC TGCTGCAAGTTGACATGAAAGCCGCGCTGGACAAGGCCGCTGAGCGTTATGTCGGCGATTTCCGCAGTGCACTGCGCAAG GAGCGCGTGGCTTACATGGGCGTCAGCCGTGAGGGCCAGGCCGTGCAGGTGCGCTTCAGCAGCGCTGCCGAACTGGCAAA AGCCCAGAAAATCCTGAACAAGGAATACCCTGACCTCACCTTCCGCACTCTGGATAGCGGTAACGACAAACTGCTGATCG CCACACTGAATCTGCAGGCACAAAAACGCATTCAGGAATTTGCTCTCAAACAGAACATTCAAACCCTGCACAATCGCGTG AACGAACTCGGCGTTGCCGAACCGATTATTCAGCAGCAAGGCCTGGATCGCATCGTGATCCAGTTGCCAGGCGTGCAGGA CACGGCAAAGGCCAAGGAAATTCTCGGCCGTACCGCGACGCTTGAAATCCGCATGGTGGACGAAGAGAAGAGCGACATGA CCACGCTGGACAAAGCCAGCAAGGGTCAAGTGCCATTTGGTGACGAGTATTATGTGGAACGTAACGGCCAGCCTATTCTG GTGAAAAAGAATGTCGTGCTGACCGGTGACTACATTACCGACGCCGGCCCTGGCCTGGATCAGCAAAACGGCGAATCCGT TGTGCATGTCACACTGGATGGTCGCGGCGCCCGTATCTTCAAACAGGCCACCAAGGAAAACGTCGGCAAGCGCATGGCGA TTCTGCTGATTGAAAAAGGCCAAGCAGAAGTCATTACCGCACCTGTTATCCGCGAAGAAATTGGCGGCGGCCGCGTGCAG ATTTCCGGCATGGCGAATGTACAGGAAGCTACCGATGTTTCATTGCTGCTGCGCGCTGGCGCGCTGGCTGCGCCGATGGA CATCATCGAAGAACGTACCGTTGGCCCAAGCATGGGTGAAGAAAACATCAAGCGCGGCTGGCACTCCACCCTGTGGGGCT TCGCTGCGATTGCCGTGTTCATGATCATCTACTACATGCTGTTCGGTAGCGTGTCGGTGCTGGCGCTGGGCGTCAACCTG CTGCTGCTGACCGCCGTGCTGTCGCTGCTGCAGGCCACGCTCACACTGCCCGGTCTGGCGGCGATTGCGCTGACGCTGGG GATGGCGATTGACGCCAACGTGCTGATCAATGAGCGTATTCGTGAAGAGCTGCGCAATGGCAACACGCCGCAGGCCGCCA TTCACGCAGGGTATGACCGTGCCTTCGATACCATTCTGGACTCCAACGTGACCACCATGATCGCCGGCCTCGCCCTGTTC ATGTTCGGCTCCGGCCCGGTCAAGGGCTTTGCCGTGGTGCACGTGCTGGGCATTTTGACTTCCATGTTCAGCGCCGTGGT GGTTTCGCGCGCGCTGGTCAACCTGATTTACGGTTACCGCCGCAAGATCAGCAAGCTGTCCATCGGCTGA Protein sequence : MNRYPLWKYILVLITLVLGVVYSLPNLFGESPAVQVSTAKSSAKLDPALLGQVEDILKQEKITYEAVFLDTNGVKVRFEN ADTQINAKDVLQGKLGKDYVVALNLISRSPSWLRSIGALPMYLGLDLRGGVHFLLQVDMKAALDKAAERYVGDFRSALRK ERVAYMGVSREGQAVQVRFSSAAELAKAQKILNKEYPDLTFRTLDSGNDKLLIATLNLQAQKRIQEFALKQNIQTLHNRV NELGVAEPIIQQQGLDRIVIQLPGVQDTAKAKEILGRTATLEIRMVDEEKSDMTTLDKASKGQVPFGDEYYVERNGQPIL VKKNVVLTGDYITDAGPGLDQQNGESVVHVTLDGRGARIFKQATKENVGKRMAILLIEKGQAEVITAPVIREEIGGGRVQ ISGMANVQEATDVSLLLRAGALAAPMDIIEERTVGPSMGEENIKRGWHSTLWGFAAIAVFMIIYYMLFGSVSVLALGVNL LLLTAVLSLLQATLTLPGLAAIALTLGMAIDANVLINERIREELRNGNTPQAAIHAGYDRAFDTILDSNVTTMIAGLALF MFGSGPVKGFAVVHVLGILTSMFSAVVVSRALVNLIYGYRRKISKLSIG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 6e-95 | 43 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 1e-94 | 43 |
