Name : Msip34_2752 (Msip34_2752) Accession : YP_003052516.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 2907266 - 2907763 bp Length : 498 bp Strand : + Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: pfs:PFLU1042 RNA polymerase sigma factor DNA sequence : ATGTCTGCCCACCATCACACCACCCTGCACGCACTTTATCGCGACCATCATGGCTGGCTTTCCCATTGGTTGCGAAACAA GCTGGGCTGCACCCAGCAAGCGGCAGACCTCGCCCAGAACACCTTCATGCGTGTACTGCAGTCGCGACAACTCATGCAAT TGCAGGAGCCACGGGCTTTTCTTACCGTATTGGCCAAGCGCGAACTTTATACCTTCTGGCGACGGCGCGACCTCGAGCAA GCTTATCTTGACGCGCTTGCCCAGCAGCCTCAGGCCAACCAGCCATCTCCTGAAGACATGCTGCTGATTCGCGAAGCTAT CGCTGCACTGGATCAGCTATTGAATGGCCTGCCGCCCAAGGTTCGGCAGGCTTTTTTGCTGAGTCGGCTGGATGGCCTTA CGCACGTGCAGATTGCTGACACCATGGCAAAATCGGTCGCCACCATTGAGCGTTATATGAAGCAGGCCCTGCTGCACTGC TATCTGGCGGCTCGATGA Protein sequence : MSAHHHTTLHALYRDHHGWLSHWLRNKLGCTQQAADLAQNTFMRVLQSRQLMQLQEPRAFLTVLAKRELYTFWRRRDLEQ AYLDALAQQPQANQPSPEDMLLIREAIAALDQLLNGLPPKVRQAFLLSRLDGLTHVQIADTMAKSVATIERYMKQALLHC YLAAR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-31 | 45 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
Msip34_2752 | YP_003052516.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 9e-32 | 45 |