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Name : Msip34_0419 (Msip34_0419) Accession : YP_003050194.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 437623 - 438147 bp Length : 525 bp Strand : + Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: mms:mma_2027 ECF subfamily RNA polymerase sigma factor DNA sequence : ATGTCCCTGATTCTTTGTCCCCGTCGTCGCGATGTGGCGGAAATGCTTTATACCCAGCATCACAGCTGGCTACAGGGCTG GCTGCGCAAAAAGCTGGGCTGCGCGCACGGGGCGGCGGACATTGCACAGGATACATTTTTGCGGCTGATGGCCTCGCGTG ATCTGCTGTTGTTGCAGGAGCCGCGGGCTTTCCTGACGCGCACGGCAACCCGCTTGCTGATTGATGATGCGCGGCACAAG AAAATTGAAGCCCTGTATCTGGAAGAACTGGCGGCGCAGCTGGAACAAGCCCATGCGCCAGACCCGGCAAAAATACTGGA AGCGGTGCGCGCACTGGCCTATCTCGTCTCGGTGCTGGAAACCCTGCCGCAGAAGCCGCGAGAGGCATTTCTGATGGCGC AGCTGGAAGAGCTGGGGCATGACGAAATCGCCCGTCGCCTGTCGGTGTCCACCCGCATGGTGCGCAAGTACCTGGTGCAG GCGCTGGTACATTGCCATGATGCGCTGGAGCAGGTGCAAGCATGA Protein sequence : MSLILCPRRRDVAEMLYTQHHSWLQGWLRKKLGCAHGAADIAQDTFLRLMASRDLLLLQEPRAFLTRTATRLLIDDARHK KIEALYLEELAAQLEQAHAPDPAKILEAVRALAYLVSVLETLPQKPREAFLMAQLEELGHDEIARRLSVSTRMVRKYLVQ ALVHCHDALEQVQA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 4e-21 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0419 | YP_003050194.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 2e-21 | 46 |
