|
Name : Msip34_0803 (Msip34_0803) Accession : YP_003050578.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 834806 - 835321 bp Length : 516 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: dac:Daci_5893 ECF subfamily RNA polymerase sigma-24 factor DNA sequence : TTGAGTTCCGCCCCTCATCACGAAGTCCACAAGCTATACAACATTCATCACGGATGGCTGGTGGAGTGGTTGCGACGCCG GCTGGGCTGCGTTCATCATGCGCATGATCTGGCACAGGATACGTTTGTCAGGGTGCTGGACAAGCCACTGGTTATTCAGG GAGTTCACGAGCCCAGGGCATTTCTTAGCAGAATCGCCCATGGCTTGATGGTCGACCAGTTCAGGCGCCGGGCCATCGAG CAGGCCTATCTTGAGGCATTGCAACATCTGCCCACCCGGCACATGGAATCGGCCGAGGAACGCATGATGAATATTGAAGC CTTGATGCGCATCGACGCGATGTTTGCCGGGCTGAATCCCAATATCAGAACGGCGTTTCTGCTGTCGCGCCTGCACGGGA TGACGTATCCCGACATTGCCCGGGAAATGAATGTCTCCCTGCGCTCCGTCGAGGGCTATATGGCAAAAGCCATCGGCCAT CTGCTTGCCAATGCCCGACAAGATACATTAGGCTAG Protein sequence : MSSAPHHEVHKLYNIHHGWLVEWLRRRLGCVHHAHDLAQDTFVRVLDKPLVIQGVHEPRAFLSRIAHGLMVDQFRRRAIE QAYLEALQHLPTRHMESAEERMMNIEALMRIDAMFAGLNPNIRTAFLLSRLHGMTYPDIAREMNVSLRSVEGYMAKAIGH LLANARQDTLG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 3e-32 | 46 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0803 | YP_003050578.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 1e-32 | 46 |
