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Name : Msip34_0806 (Msip34_0806) Accession : YP_003050581.1 Strain : Methylovorus glucosetrophus SIP3-4 Genome accession: NC_012969 Putative virulence/resistance : Virulence Product : ECF subfamily RNA polymerase sigma-24 subunit Function : - COG functional category : K : Transcription COG ID : COG1595 EC number : - Position : 839360 - 839860 bp Length : 501 bp Strand : - Note : TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: xca:xccb100_0572 ECF-type sigma factor DNA sequence : ATGCCTGACAATCCAATTTCCCCTACGGTTGAAAGCCTGTACAGCGACCACCATGGTTGGCTGTATGGCTGGCTCAGGCG CAAGCTGGGAGATTCGTTCGCCGCTGCAGATCTTGCGCAGGATACGTTCGTCAGTATCCTCACCGCAAGCTCTGCCAGCC AGATTCAGGAGCCAAGGCCATTTCTCGCCACTATTGCGCGCCGCTTGATCGCCAACCGCTATCGCCGTCAGCTGCTCGAA AATGCCTACCTTGACATGCTGGCCACTTTGCCAGAAGCGCTGATGCCATCGCCCGAGGCACAATACCTGGCATTAGAGGC TTTGCGTCAGCTCGACCAGGCGCTTAACGGCTTGCCACCGCGGGTGAAAGAAGCCTTTTTGCTTGCGCACTTTGAAGAGC TGAGTTACCTGGAGATCGCAACGCGGCTGAAGGTGTCCATCAGCTCAGTCAAGCAATACCTTACGCGTGCCAACCGGCAT TGTCTGTTCGCGCTGGCCTGA Protein sequence : MPDNPISPTVESLYSDHHGWLYGWLRRKLGDSFAAADLAQDTFVSILTASSASQIQEPRPFLATIARRLIANRYRRQLLE NAYLDMLATLPEALMPSPEAQYLALEALRQLDQALNGLPPRVKEAFLLAHFEELSYLEIATRLKVSISSVKQYLTRANRH CLFALA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAL08458.1 | FecI | Virulence | SRL | Protein | 2e-38 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Msip34_0806 | YP_003050581.1 | ECF subfamily RNA polymerase sigma-24 subunit | VFG1049 | Protein | 8e-39 | 50 |
