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Name : nifS (HELPY_0224) Accession : YP_003057033.1 Strain : Helicobacter pylori B38 Genome accession: NC_012973 Putative virulence/resistance : Unknown Product : cysteine desulfurase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1104 EC number : 2.8.1.4 Position : 218891 - 220054 bp Length : 1164 bp Strand : + Note : Evidence 1a : Function experimentally demonstrated in the studied strain; PubMedId : 11123951, 16185064, 15952888, 15667274, 1219616, 8482384; Product type e : enzyme DNA sequence : TTGTTACAACGAATTTATTTAGACAATAACGCTACAACTAGGATTGACCCTAAAGTCAAGGAGATCATGGATCCTTTTTT AAGGGATCATTATGGGAATCCTAGCTCGTTGCACCAGTTTGGCACAGAAACCCACCCAGCCATTGCAGAAGCATTGGATA AGCTTTATAAAGGCATTAACGCTAGGGATATAGACGATGTGATCATCACTTCTTGCGCGACAGAGAGCAATAATTGGGTT TTAAAGGGCGTGTATTTTGATGAATGCTTGAAAAAAGGCAAAAACCATATTGTAACCACGGTTGCAGAGCATCCGGCGGT GCGATCCACTTGTAATTTTTTAGAAAGCTTGGGGGTGGAGGTTACTTACTTGCCCATTAATGAGCATGGGAGTATCACCG CAGAGCAAGTCAAAGAAGCGATCACAGAAAAAACCGCTCTAGTGAGCGTGATGTGGGCGAATAATGAAACCGGTCTCATT TTCCCTATTGAAGAAATTGGGGCTATCTGTAAAGAAAAGGGCGTGTTGTTCCATACCGATGCGGTGCAAGCGATTGGTAA AATCCCTGTAGATGTGTTAAAAGCGAATGCAGATTTTCTTTCTTTTAGCGCGCACAAATTCCATGGGCCTAAAGGCATTG GGGGTTTATACATTAGAAGTGGGGTGGGATTGACCCCTCTTTTTCATGGCGGGGAGCATATGAATGGCAGGCGCAGCGGG ACTTTGAATGTGCCTTATATTGTGGGAATGGGCGAAGCGATGAGATTAGCCGTAGAGCATTTAGACTATGAAAAAGAAGT GGTAGGGAAATTGCGCGACAAATTAGAAGAAGCGCTTTTGAAAATCCCTGATGTGATGGTGGTAGGGGATCGAATCCATC GTGTGCCTAACACGACTTTAGTCAGCGTGAGAGGGATTGAAGGAGAGGCCATGCTGTGGGATTTGAATCGCTCTAATATC GCCGCTTCCACAGGGAGCGCGTGCGCGAGTGAAGATTTAGAGGCTAATCCTGTCATGGTAGCGATTGGAGCGAGCAAGGA ATTAGCTCATACCGCTATCAGGCTTTCATTGAGCCGTTTTAACACGGAAGCTGAAATTGACAAAACGATTGAAGTTTTCT CTCAAGCGGCTGTAAGGTTGAGAAATATTTCAAGCTCTTATTAA Protein sequence : MLQRIYLDNNATTRIDPKVKEIMDPFLRDHYGNPSSLHQFGTETHPAIAEALDKLYKGINARDIDDVIITSCATESNNWV LKGVYFDECLKKGKNHIVTTVAEHPAVRSTCNFLESLGVEVTYLPINEHGSITAEQVKEAITEKTALVSVMWANNETGLI FPIEEIGAICKEKGVLFHTDAVQAIGKIPVDVLKANADFLSFSAHKFHGPKGIGGLYIRSGVGLTPLFHGGEHMNGRRSG TLNVPYIVGMGEAMRLAVEHLDYEKEVVGKLRDKLEEALLKIPDVMVVGDRIHRVPNTTLVSVRGIEGEAMLWDLNRSNI AASTGSACASEDLEANPVMVAIGASKELAHTAIRLSLSRFNTEAEIDKTIEVFSQAAVRLRNISSSY |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96060.1 | cysteine desulfurase | Not tested | T-PAI | Protein | 4e-49 | 41 |
