Gene Information

Name : rnhA (CLIBASIA_03435)
Accession : YP_003065209.1
Strain : Candidatus Liberibacter asiaticus psy62
Genome accession: NC_012985
Putative virulence/resistance : Unknown
Product : ribonuclease H
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0328
EC number : 3.1.26.4
Position : 462587 - 463045 bp
Length : 459 bp
Strand : -
Note : COG0328 Ribonuclease HI

DNA sequence :
ATGGATTCTAAACATTTGAGAGAAGTTCACGCATATACTGATGGCGCTTGTTCCGGCAATCCAGGTCCTGGAGGATGGGG
CGTGCTACTACGATATAAAGGAAAAGAAAAAATTATTTCTGGAGGAGAGAAAGAAACAACTAATAATAGAATGGAATTGA
TGGCTGCGATTAAAGCTCTGACTGCTCTCAAGTACCCTTGTAAAGTACTTTTATATACAGATAGCTCCTATGTTCATAAA
GGTTTTTCACAATGGATAAAAAAATGGCAACAAAATGGGTGGAAGACTTCTGATAAAAAAACCGTTAAAAATATAGATCT
CTGGATGAAATTTGTAGAAGCCTCTGCACAACATAAAGTTGATTTGTATTGGATAAAAGGTCATGCGGGCAATCAAGAAA
ACGAGAAGGTTGATCGTATAGCACGGAACGCTGCCGTTTCTTTTAAAAACAAAATATAA

Protein sequence :
MDSKHLREVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLLYTDSSYVHK
GFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGNQENEKVDRIARNAAVSFKNKI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rnhA AAO17224.1 RnhA Not tested tcd island Protein 4e-31 54