Gene Information

Name : METDI2858 (METDI2858)
Accession : YP_003068374.1
Strain : Methylobacterium extorquens DM4
Genome accession: NC_012988
Putative virulence/resistance : Unknown
Product : transketolase subunit alpha
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3959
EC number : 2.2.1.1
Position : 2780651 - 2781511 bp
Length : 861 bp
Strand : +
Note : Evidence 3 : Function proposed based on presence of amino acid motif, structural feature or limited homology; Product type pe : enzyme

DNA sequence :
ATGGTGCACCCCCCCGAGATCCACCCCCGCGAAGGCTCGAACGTTTCGCTCGACAACCGCGCCTACCGCATCCGCCGCCA
CGCCCTGCTGATGGGCGAGGTCCAGGGCCAGGGCTACATCGCCCAGGCGCTCGGCATCAGCGACGTGCTGGCGGTCAGCT
ACTTCCACGCCATGACCTACCGCCCGGACGATCCGGAATGGGAGGGCCGGGACCGCTTCCTGCTCTCGATCGGCCACTAC
GCCATCGCCCTCTACGCCGCGCTGATCGAGGCCGGCATCATCCCGGAGGACGAACTCGGGACCTACGGTTCCGACGACAG
CCGCCTGCCGATGTCCGGCATGGCCGCCTACACGCCCGGCATGGAGATCACCGGCGGCTCCCTCGGCCATGGGCTCGGCA
TCGCCGTCGGGATGGCGCTCGGTCTCAAGCGCAAGGCCTCGGCCGCCTTCGTCTACAACCTGTTCTCCGACGGCGAACTC
GACGAGGGCTCGACCTGGGAGGCGGCGATGTCGGCGGCGAGCTTCGGGCTCGACAACCTGATCGGCATCGTCGACGTCAA
CGGCATGCAGGCCGACGGGCCGTCCCGCGGCGTCCTGAACTTCGAGCCGCTCGCGCCGAAATTCGAGGCCTTCGGCTGGT
TCGTCCAGCGGGTGGACGGCAACGACATCGACGCCCTGGTGAAGGCCTTCGACGCCGCCCGGTCCCATCCGGAGCGCTGC
CCGCGCATCATCATCTGCGACACCAAGATGGCCAAGGGCGTGCCCTTCCTCGAGGCGCGCGAGCGCAATCACTTCCTGCG
GGTCGAGGCGGACGAATGGCGCCAAGCCCTGGCGGTTCTGGACGAAGGGAGGCTCCCATGA

Protein sequence :
MVHPPEIHPREGSNVSLDNRAYRIRRHALLMGEVQGQGYIAQALGISDVLAVSYFHAMTYRPDDPEWEGRDRFLLSIGHY
AIALYAALIEAGIIPEDELGTYGSDDSRLPMSGMAAYTPGMEITGGSLGHGLGIAVGMALGLKRKASAAFVYNLFSDGEL
DEGSTWEAAMSAASFGLDNLIGIVDVNGMQADGPSRGVLNFEPLAPKFEAFGWFVQRVDGNDIDALVKAFDAARSHPERC
PRIIICDTKMAKGVPFLEARERNHFLRVEADEWRQALAVLDEGRLP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96117.1 transketolase Not tested T-PAI Protein 1e-87 75
unnamed AAT96177.1 transketolase Not tested T-PAI Protein 5e-87 74
unnamed AAT96229.1 transketolase Not tested T-PAI Protein 2e-87 74
unnamed AAT96056.1 transketolase Not tested T-PAI Protein 5e-88 74
unnamed AAT96100.1 transketolase Not tested T-PAI Protein 3e-87 73