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Name : ccmF (TERTU_1868) Accession : YP_003073367.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Unknown Product : cytochrome C biogenesis protein CcmF Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1138 EC number : - Position : 1914018 - 1916051 bp Length : 2034 bp Strand : + Note : identified by match to protein family HMM PF01578; match to protein family HMM TIGR00353 DNA sequence : ATGATTCCTGAGTTTGGCCAACTGTCACTTATTATTGCTCTGCTTCTCGCCACTTGTCTTTCGGTTGTACCTATGGCGGG GAGTTTTAACGGGCGATTGGTGTGGATGCTGTCTGCGCGGTCGCTTAGTGTCGGCATGTTCGTGTTTGTTGCGCTCGCGT TTGCCATTCTCGCGTACGCGTTTTACACAGACGACTTCTCAGTCGCTTACGTCGCCCGGCAATCGAACTTGGTGTTACCC GTTCAATACAAGTTGAGTGCAGTTTGGGGCGGGCACGAAGGTTCGCTATTGCTGTGGGTGTTTATTCTCGCGAGCTGGAC GCTTGCGGTGAGCGTATTTTCCCGCCGTCTGCCCATTGATGTGCTCGCGCGAGTGCTTTCGGTAATGGGGATGATTGCGG TCGGCTTTCTCCTGTTCACTATCGCCACATCGAACCCGTTTGAGCGCATTTTGCCGAATATTCCCAGCGACGGCTCCGAT TTGAATCCACTCTTGCAAGACCCAGGTCTGATTATTCACCCGCCGATGTTGTATATGGGGTATGTGGGATTTTCCGTCGT ATTTGCGTTTGCGATAGCGGCGCTTTTATCCGGGCGGATGGACGCAGCCTGGGCGCGTTGGTCGCGGCCCTGGACTAACG CGGCCTGGTGTTTTCTGAGTTTGGGGATTGCGTTGGGCAGCTGGTGGGCGTACTACGAATTGGGCTGGGGTGGCTGGTGG TTTTGGGACCCGGTAGAGAACGCATCCTTACTGCCATGGTTAGTCGGGACCGCACTTATTCATTCTTTAGCGATGACAGA AAAGCGTGGCGTCTATAAAAACTGGACCCTTTTACTCGCGATTTTCAGTTTTTCACTTAGCCTGCTGGGGACATTCCTGG TGCGCTCAGGTGTAATCACATCTGTCCATGCGTTTGCATCGGACCCAACCCGTGGGGTGTTTATTCTGGCGTTCCTGGGA ATAGTGGTGGGCGGCTCGTTAACTCTTTTCGCTGTTCGCGCGCAAGTGGTTAAAAGCATTTCCGGCTTCGACTTTCTGTC CCGCGAAGCGTTTCTGCTGGCCAACACTATCTTGTTCTTCATCGCGGCGTTATTTGTGCTTCTGGGCACGGTGTATCCAA TCATTTCCGATGCGTTGAACCTAGGTAAGATTTCCGTTGGCGAACCCTGGTTTAATTTTTTCTTTGTGAAACTGATGGCG GTAGTTGCTGCGCTCTTGGGCATCGGCATTATGCTCAACTGGAAAAAAACCGACTACGGTAAAATTCGGCCCTGGCAAAC CGTGCCGATCATTGGTGCTTTGTGGTTGGGCAGCTTTATCCCGGGGGTGATCGAAGGAGATTATTCAATTGCTGCAGCCA TAAGCATCACCTTGGGTAGCTGGGTCATTTTTGCGTCTTTGGCGGATTTAAAACGTAAAATTCGTCATGCCCCGAGATTT ACCGCGGGCCTGAGCAAGCTGTCACCCAGTTATTACGGTATGTTGATTGCTCATATTGGATTCGCATTTAGCTTAATGGG CGCAAGCCTGAATACGATCTATAGTGATCAGCGGGATGTTCGAATTGCGATTGGTGATTCGGTGTTCGCTGCCGGCTATG AATATGAGCTACTGGATGTCACTCGGGTGAAAGGCGCAAACTATTTTGCTGATGTCGGTGAGATTATTGTTCGCAAACAT GGCAAAGAAGTGTCGCGATTACGCCCAGAAAAACGCCGCTATTTTTCCGGCGGTAATGTGATGACCGAGGCGGATATAGA CGCAGGCTTTACGCGGGATATCTATGTGGCTCTGGGCGAGCAACTGGATAACACCGACTGGGCGATTCGCATCCACTTTA AACCGGTTGTGCGCTGGATTTGGTTAGGCGCTATTCTGATGGCGCTTGGAGGTGGTATTGCCATGGCGGATAAACGCTAT CGCGCTCGTCAATCAGTTCGCGAACAAGTAACGGATGCGGATGACAGTCTAGAAGACGCGCAGGGCGAGGGTCAGCCTGC CACTGCCATGACAGACGGAGTCGCCTCCCAGTGA Protein sequence : MIPEFGQLSLIIALLLATCLSVVPMAGSFNGRLVWMLSARSLSVGMFVFVALAFAILAYAFYTDDFSVAYVARQSNLVLP VQYKLSAVWGGHEGSLLLWVFILASWTLAVSVFSRRLPIDVLARVLSVMGMIAVGFLLFTIATSNPFERILPNIPSDGSD LNPLLQDPGLIIHPPMLYMGYVGFSVVFAFAIAALLSGRMDAAWARWSRPWTNAAWCFLSLGIALGSWWAYYELGWGGWW FWDPVENASLLPWLVGTALIHSLAMTEKRGVYKNWTLLLAIFSFSLSLLGTFLVRSGVITSVHAFASDPTRGVFILAFLG IVVGGSLTLFAVRAQVVKSISGFDFLSREAFLLANTILFFIAALFVLLGTVYPIISDALNLGKISVGEPWFNFFFVKLMA VVAALLGIGIMLNWKKTDYGKIRPWQTVPIIGALWLGSFIPGVIEGDYSIAAAISITLGSWVIFASLADLKRKIRHAPRF TAGLSKLSPSYYGMLIAHIGFAFSLMGASLNTIYSDQRDVRIAIGDSVFAAGYEYELLDVTRVKGANYFADVGEIIVRKH GKEVSRLRPEKRRYFSGGNVMTEADIDAGFTRDIYVALGEQLDNTDWAIRIHFKPVVRWIWLGAILMALGGGIAMADKRY RARQSVREQVTDADDSLEDAQGEGQPATAMTDGVASQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| ccmF | YP_217241.1 | cytochrome c-type biogenesis protein | Not tested | SPI-12 | Protein | 5e-125 | 55 |
| ccmF | AAN62106.1 | putative cytochrome C-type biogenesis protein CcmF | Not tested | PAGI-2(C) | Protein | 1e-129 | 53 |
