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Name : secD (TERTU_2655) Accession : YP_003074065.1 Strain : Teredinibacter turnerae T7901 Genome accession: NC_012997 Putative virulence/resistance : Unknown Product : protein-export membrane protein SecD Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG0342 EC number : - Position : 2925500 - 2927365 bp Length : 1866 bp Strand : - Note : identified by match to protein family HMM PF02355; match to protein family HMM PF07549; match to protein family HMM TIGR00916; match to protein family HMM TIGR01129 DNA sequence : ATGAACCGCTATCCGCTTTGGAAATACCTTTTGATACTCGTCATCCTTGGTGTCGGGTTCATTTATGCGCTGCCCAACAT CTATGCACCCGATCCCGCTGTCCAGATTTCCGGGTCGTCTGCGAGTTTGAAAATCGATCAAAAGGCGATGGATAAAGCTG TTGCAGTGTTGGACAAGGGCAATATTGCCTATTTTGGCGTCGAACACGACGATCTGAACGGTCTTATCCGTTTGCGCCAA CAGAGCGACCAATTGAAAGCTCAGCGGGAAATTCAAGAAGCGCTTGGCGGCGATTATGTTGTAGCGGTGAACCTTGCGCC GACAACCCCGGACTGGTTATTGGAAATGGGCGCGGGGCCAATGAAGCTGGGCTTGGACTTGGCCGGCGGTGTGCACTTCT TGTTGGAAGTAGATACTCCCAAAGTACTGGCGGCAGAGTATAAGAGCATTCAGGAGCAACTGGAGAAGCAAATCCGCTCA GAGCGTATTTACGGTGCACGCGTAACCCTGCGTGACAACCAGCTGACCGTCGTTGCGGACAGCGATGCTGACCGCATGAA ACTGACTGAGTTTATGCGCTCAGACGTGCCCGAACTGCAATACGAACGCGCCGAAGAGTCCGGCAAGTTCATTGTTCGCG CTCGTCTTTCCGATGCCTATGTGCGTGAAAAAGAAGACTACGCAGTAACCCAGAACCTCACCACCTTGCGCAACCGGGTC AACGAAATTGGTGTTGCTGAGCCACTGGTGCAACGTCAGGGCCGCAATCGTATTGTGGTCGAGCTGCCGGGCATCCAAGA CACGGCGCGCGCCAAATCGATTATTGGTAAAACTGCAAACCTCGAATTCCGCCTGGAAGCCAATGAATCGACACTCTCCA GTCAAAAGGAAAGTTACCCCTGGCGTGATGAAGCGAGTCAGCGCCGTTTCGGCGACAACACGGTTGAAAAGCGTGCAGTT ATTACCGGTGAGCGCGTAACCAATGCGCAGGTGGGTTTTGATCAGGATACCAGCCAGCCGCAGGTAAACATTACCCTGGA CGGGCAGGGTGGAGCGGCAATTAACCGCGCGACACGTCATAACGTCGGTCGTCGTATGGCGGTACTGTTTATTGAGTACA AGACCAAGTCTACCAAATACAAAGACGAGAACGGCGAAGAGCAAACCCGCTACGAGCAAGTGCCGGAAGCGGGCATTATC TCTTTCCCGACCGTGCAAAGTGCGCTCGGCAGGAACTTCCGTATCACCGGCTTGGATAATCCGCAGGAAGCCTCTGAATT GGCGCTGTTATTACGCGCCGGTGCGCTGGCTGCACCTATGGGCTTTGTAGAAGAACGTACCATCGGCCCATCGCTGGGTG CGGAAAATATTGGCTTAGGCATTAAATCAGTGCAGATTGGTCTCGGTCTGGTATTGGTATTTATGTTGTTCTACTACCGG GTTTTTGGCCTTGCCGCGAATATTGCGTTGGGAACCAACCTGGTACTGTTAGTGGCGGTGATGTCGATTTTCGGTGCGAC CCTGACCTTGCCGGGTATTGCCGGTATCGTATTGACGGTGGGTATGGCGGTGGACGCCAACGTGCTGATCTTCTCGCGGA TTCGCGAGGAGCTTCGAGATGGCATGCCCGCGCAGTCGGCCATTAAAGCGGGGTTTGAGCGTGCATTTGAGACTATCCTC GACGCCAACCTCACTACGTTTATTGTGGCCATTATTCTTTATGCCATTGGCTCCGGTTCGGTGAAAGGTTTCGCCGTAAC TTTGGCCATCGGTATTGTGACCTCCATGTTCACAGCCGTTATGGTGACGCGGGCGATCATTAACTTGATTTACGGCGGTC GTAAAATCAATAAATTGTGGATTTAA Protein sequence : MNRYPLWKYLLILVILGVGFIYALPNIYAPDPAVQISGSSASLKIDQKAMDKAVAVLDKGNIAYFGVEHDDLNGLIRLRQ QSDQLKAQREIQEALGGDYVVAVNLAPTTPDWLLEMGAGPMKLGLDLAGGVHFLLEVDTPKVLAAEYKSIQEQLEKQIRS ERIYGARVTLRDNQLTVVADSDADRMKLTEFMRSDVPELQYERAEESGKFIVRARLSDAYVREKEDYAVTQNLTTLRNRV NEIGVAEPLVQRQGRNRIVVELPGIQDTARAKSIIGKTANLEFRLEANESTLSSQKESYPWRDEASQRRFGDNTVEKRAV ITGERVTNAQVGFDQDTSQPQVNITLDGQGGAAINRATRHNVGRRMAVLFIEYKTKSTKYKDENGEEQTRYEQVPEAGII SFPTVQSALGRNFRITGLDNPQEASELALLLRAGALAAPMGFVEERTIGPSLGAENIGLGIKSVQIGLGLVLVFMLFYYR VFGLAANIALGTNLVLLVAVMSIFGATLTLPGIAGIVLTVGMAVDANVLIFSRIREELRDGMPAQSAIKAGFERAFETIL DANLTTFIVAIILYAIGSGSVKGFAVTLAIGIVTSMFTAVMVTRAIINLIYGGRKINKLWI |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| secD | AAT96103.1 | SecD | Not tested | T-PAI | Protein | 1e-137 | 54 |
| secD | AAT96179.1 | SecD | Not tested | T-PAI | Protein | 3e-137 | 54 |
| secD | AAT96039.1 | SecD | Not tested | T-PAI | Protein | 2e-137 | 53 |
| secD | AAT96067.1 | SecD | Not tested | T-PAI | Protein | 2e-137 | 53 |
| secD | AAT96119.1 | SecD | Not tested | T-PAI | Protein | 2e-137 | 53 |
