Gene Information

Name : cchA (ECSP_3395)
Accession : YP_003079238.1
Strain : Escherichia coli TW14359
Genome accession: NC_013008
Putative virulence/resistance : Virulence
Product : carboxysome structural protein, ethanolamine utilization protein
Function : -
COG functional category : Q : Secondary metabolites biosynthesis, transport and catabolism
COG ID : COG4577
EC number : -
Position : 3347341 - 3347634 bp
Length : 294 bp
Strand : -
Note : -

DNA sequence :
ATGGAAGCATTAGGAATGATCGAAACCCGGGGCCTGGTTGCACTGATTGAGGCTTCTGACGCGATGGTGAAAGCTGCGCG
CGTCAAGCTGGTTGGTGTTAAGCAGATTGGCGGCGGCCTGTGTACTGCCATGGTTCGTGGTGATGTTGCAGCCTGTAAAG
CGGCGACCGATGCCGGTGCCGCAGCGGCACAGCGTATCGGCGAGCTGGTATCTGTACACGTTATCCCGCGTCCGCACGGC
GACCTGGAAGAAGTGTTCCCGATCGGCCTGAAAGGCGATAGCAGCAACCTGTAA

Protein sequence :
MEALGMIETRGLVALIEASDAMVKAARVKLVGVKQIGGGLCTAMVRGDVAACKAATDAGAAAAQRIGELVSVHVIPRPHG
DLEEVFPIGLKGDSSNL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42077.1 hypothetical protein Not tested PAI II 536 Protein 2e-14 62
unnamed CAD42078.1 hypothetical protein Not tested PAI II 536 Protein 6e-14 61
unnamed CAD42079.1 hypothetical protein Not tested PAI II 536 Protein 2e-12 56

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cchA YP_003079238.1 carboxysome structural protein, ethanolamine utilization protein VFG1596 Protein 9e-15 62
cchA YP_003079238.1 carboxysome structural protein, ethanolamine utilization protein VFG1597 Protein 2e-14 61
cchA YP_003079238.1 carboxysome structural protein, ethanolamine utilization protein VFG1598 Protein 7e-13 56