Gene Information

Name : Dfer_5192 (Dfer_5192)
Accession : YP_003089556.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Unknown
Product : class V aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 6259855 - 6261033 bp
Length : 1179 bp
Strand : -
Note : PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: aba:Acid345_0484 aminotransferase, class V

DNA sequence :
TTGAAACTGCCTGTTTATTTGGACAATAATGCTACAACCCCTGTGGACCCGAGGGTTTTACAGGAAATGCTGCCCTATTT
TTCCGAGAAATTCGGCAATGCGGCCAGTCGTACGCATTTGTATGGCTGGGAGGCGGAAGAATCGGTGGATATTGCACGCG
AGCAGATCGCCGGCCTCATTGGCGCACACCAGCAGGAGATTGTGTTTACCTCCGGTGCTACCGAGGGCGTCAATCTGGCC
ATTAAAGGCATTTTCGAAAATTCCTTACAACCGGAGAAACACATCATCACCGTCGCTACCGAACACAAAGCGGTGCTCGA
CACCTGCAAGCATATCGAACGGCTCGGCGGTACAGTTACCTACCTGCCCGTGAATGCCAACGGGCTGATCGACCTGACCG
CGCTTGAAAGCGCCATTACCCCGCACACGATCCTGATCGCGGTGATGTACGCCAACAATGAAACCGGCGTGATCCAGCCT
ATCCGTGAGATTGCTGCCATTGCCAAATCACACCACATTCCCTTCCTGTCCGACGCCACGCAAGCTGTGGGCAAGGTCCC
CGTGAATGTCCTGAGCGACGGCATCGACCTGCTTGCATTAAGTGCGCACAAAATTTACGGGCCCAAAGGCGTGGGCGCAC
TCTACGTCCGCAAAAAGAACCCCGCCATTATCCTCACCGCCCAGATCGACGGCGGCGGCCACGAACGCAATATGCGTAGC
GGCACGCTCAATGTGCCGGGGATCGTCGGGCTTGGCTGGGCCTGTGAAATTGCCGGGGCCGAAATGGCGCGGGAAAGCAA
GCGGCTCAGCGCACTGCGGAATGCGTTGGAAGTGGAACTATTGGTACTGCAAGATATCGAGATCAATGCCGAAGACGCCC
GCCGGCTGCCGCATTGTACCAATATTTCGTTCGGACAGGTGGATGGGGAGAAACTGATTTTCGAGGCGGGCAGCGACCTG
GCGTTTTCGCGCAGCTCGGCCTGCACCTCCGCCACACTGGAACCCAGCTATGTGCTGAAAGCGATGGGCCTTTCGGACGA
ACGCATTCATAATTCGTTCCGTTTCAGTTTCGGACGGTTTTCTACCGAGGAGCATGTAAACCACGCGGTTTCTGTTATTT
CAAAGATTGTAAAACAACATCGCCATGAAAGAAATCACGGACATCATCCGGTCGTATGA

Protein sequence :
MKLPVYLDNNATTPVDPRVLQEMLPYFSEKFGNAASRTHLYGWEAEESVDIAREQIAGLIGAHQQEIVFTSGATEGVNLA
IKGIFENSLQPEKHIITVATEHKAVLDTCKHIERLGGTVTYLPVNANGLIDLTALESAITPHTILIAVMYANNETGVIQP
IREIAAIAKSHHIPFLSDATQAVGKVPVNVLSDGIDLLALSAHKIYGPKGVGALYVRKKNPAIILTAQIDGGGHERNMRS
GTLNVPGIVGLGWACEIAGAEMARESKRLSALRNALEVELLVLQDIEINAEDARRLPHCTNISFGQVDGEKLIFEAGSDL
AFSRSSACTSATLEPSYVLKAMGLSDERIHNSFRFSFGRFSTEEHVNHAVSVISKIVKQHRHERNHGHHPVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 2e-78 50