Gene Information

Name : Dfer_5611 (Dfer_5611)
Accession : YP_003089966.1
Strain : Dyadobacter fermentans DSM 18053
Genome accession: NC_013037
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 6746949 - 6747611 bp
Length : 663 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bvu:BVU_2346 ABC transporter ATP-binding protein

DNA sequence : 
ATGATCAAATTACAAAACGTAGAAAAAGTTTACCGCACGAGCTCTATCGAGACGCTCGCTTTGAACAATATCAACCTGGA
TGTTAAAAAAGGCGAATTCGTTTCGATCATGGGGCCGTCGGGTTGTGGGAAGAGCACATTGCTCAACATCATCGGGTTGC
TGGACGCGCCATCGAAGGGCCAGATCGAGATCGACGGCACGCCGGTGGAGCGCTACACCGACAAACACCTGGCCGAATTG
CGCAACCGGAAGCTGGGTTTTATTTTTCAGAGTTTTCACCTGATCAATGATCTATCAGTGGTAGATAACGTCGAAATTCC
GCTGCTTTACAGGAATACATCCGCGAAGCAGCGCCGAGAGCTCGCTCGGAATGCGCTGGAAAAAGTCGGATTGAGCAATC
GCATGAAGCATTTTCCCAAGCAGCTTTCGGGCGGACAGAAACAGCGCGTAGCCATTGCCCGGGCAATCGTCGGCAATCCC
GAAATCATCCTCGCCGACGAGCCTACCGGCAACCTCGACAGCGCCATGGGCAACGAGATCCTCGGCATTCTGCAAAAGCT
GAATAGCGACGGCGCGACGATCGTAATGGTAACCCACGACGAAGCCATGGCCAAAAAAACCGACCGGCTCATCAGGCTGT
TCGACGGAACGCAGGTTAGTTAA

Protein sequence : 
MIKLQNVEKVYRTSSIETLALNNINLDVKKGEFVSIMGPSGCGKSTLLNIIGLLDAPSKGQIEIDGTPVERYTDKHLAEL
RNRKLGFIFQSFHLINDLSVVDNVEIPLLYRNTSAKQRRELARNALEKVGLSNRMKHFPKQLSGGQKQRVAIARAIVGNP
EIILADEPTGNLDSAMGNEILGILQKLNSDGATIVMVTHDEAMAKKTDRLIRLFDGTQVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-37 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_5611 YP_003089966.1 ABC transporter NC_012469.1.7686878. Protein 2e-52 53
Dfer_5611 YP_003089966.1 ABC transporter CP001581.1.gene798.p Protein 1e-38 44
Dfer_5611 YP_003089966.1 ABC transporter NC_008702.1.4606598. Protein 3e-40 44
Dfer_5611 YP_003089966.1 ABC transporter CP001581.1.gene598.p Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dfer_5611 YP_003089966.1 ABC transporter VFG0869 Protein 7e-23 43