|
Name : Phep_3347 (Phep_3347) Accession : YP_003093603.1 Strain : Pedobacter heparinus DSM 2366 Genome accession: NC_013061 Putative virulence/resistance : Virulence Product : bacteriocin ABC transporter Function : - COG functional category : V : Defense mechanisms COG ID : COG2274 EC number : - Position : 3969884 - 3972049 bp Length : 2166 bp Strand : + Note : PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family DNA sequence : ATGAGCATCAAAGTAAAACAACGCGACATCACAGATTGCGGCGCAGCCTGCCTGGCCTCTGTTGCGGCACATTACAAATT AGACCTGCCCGTTGCACGCATCCGGCAGCTGGCCGGAACTGATAAAAAAGGCACTACCGTTTTGGGCATAGTAGAAGCAG CCCAAAAGCTGGGATTTGAAGCCAAGGGTGTTAAAGGACCTTTCGAAAGCCTCTTCAAAATACCCACACCCGCTATTGCC CATATCCTTGTAGGTACCATACTGCAGCACTATGTAGTCATTTATAAGGTAAACAAAAAATTTATTGAGGTGATGGACCC AATAGACGGGCAGCTGCAGCGCAAAAGCCATGAAGAATTTAAAGGCGAATGGACAGGTGCGCTTGTACTGCTGCTACCTG CAGAAGAATTCCAGGCAGGAAATGAAAAAATATCCATACAGGGTCGCTTCTGGAACCTCATCAAGCCACATAAGAACATT TTGATACAAGCCCTGTTTGGCGCTATTGTATATACCATACTGGGGCTTTCTACCTCGGTCTTTGTACAAAAACTTGTCGA TTTTGTCCTGGTAGACAGCAACCGGAACCTACTGAACATGATGGGTATAGCCATGCTCCTCATCCTGCTGGTACAACTCT TTATCGGCACTGCAAAAACCATTTTTACGTTAAAAACCGGACAAATGATTGATGCCCAGCTCATCCTTAGCTATTATAAA CACCTGCTTAAACTTCCCCAGCAGTTTTTTGATACCATGCGTGTAGGCGAGATCATTTCGCGCATCAATGATGCGGTAAA GATCAGGACCTTTTTAAATGATGTCAGCATCAATTTCCTGGTCAACCTGTTCATCGTTTTTTTCTCTTTTGTGATGATGT TCACGTATTATTGGAAACTGGCTCTTATCATGCTTTCCGTAATCCCGGTATACCTGGTGGTCTATGTACTAACCAATAAG CTTAATAAAAAAGCACAAAGGAAACTGATGGAAGACTCCGCCGAGCTGGAATCACAATTGGTAGAAAGTTTAAATGCCAT AGGCACCATCAAACGCTTCGGACTGGAGAACCACGCCAATGAAAAAACAGAGAGCCGGTTTGTAAAACTGTTGCATACAG GTTACAGTTCCAACCTCAACTCCGTATTTTCAGGCACCTCTGCTGAACTCATCTCCCGCCTGCTTACCATTGTGCTACTC TGGATAGGTGCCGGTTTTGTACTCGACAACATGCTTACTCCTGGCGAACTGCTCTCCTTTTACACACTGATCGGTTATTT TACAGGCCCTATATCTGCGCTCATAGGCATGAACAAAACCTTACAGGATGCCATTATTGCATCAGACAGGTTATTCGAGA TCATGGATCTGGAACGCGAAAACGATGAAAACCAGATTGAACTGAGCCCGGAACAAATAGGTGACATCCGCTTTGAGCAG GTATCTTTCCGTTATGGAACCAGGATAAATGTATTTGAAGATCTCAATTTAAGCATCCCAAAAGGTAAGTTTACAGCCAT TGTTGGCGAAAGTGGTTCGGGCAAATCCACGCTAATGGCCATCCTTCAAAATATTTACCCCATACAAAAAGGTAACATCA GCATCGGGAAATATGATTTGAAGTATATCCGCACAGCATCATTACGACAAATCATAGCTGTAGTACCGCAAAAAATAGAT CTTTTTGCAGGTAATGTGGTCGATAATATTGCCATAGGTGATCATGAACCCGATATGCAGCGTATCCTTGATATTGCAGA GCAATTGGGTATCCTCGATTTTATAGAAACCCTGCCCAGGGGATTTCAAACCTATCTGGGCGAGAACGGCACCACTCTTT CAGGCGGACAAAGGCAACGCATTGCCATTGCCAGGGCCTTATACCGGCAACCTGAAATCCTGATCCTCGACGAGGCCACC TCATCCCTCGATTCTGCTTCCGAACAATATGTTCAGAAGGCAATCAACCTGTTAAAGACCTGTAATAAAACTGTAATTGT AATTGCCCACCGTTTGAGTACCTTAAACCACGCCGATAAGATTATAGTGCTCGACAAAGGTAAAGTACTCGAGGAAGGTA CACATAAGGAATTGTTGTACAAAGCAGATTCTGCATATGCTAATCTCTGGAAACTACAAATGCCACAATTGCTGGTTAAA AACTGA Protein sequence : MSIKVKQRDITDCGAACLASVAAHYKLDLPVARIRQLAGTDKKGTTVLGIVEAAQKLGFEAKGVKGPFESLFKIPTPAIA HILVGTILQHYVVIYKVNKKFIEVMDPIDGQLQRKSHEEFKGEWTGALVLLLPAEEFQAGNEKISIQGRFWNLIKPHKNI LIQALFGAIVYTILGLSTSVFVQKLVDFVLVDSNRNLLNMMGIAMLLILLVQLFIGTAKTIFTLKTGQMIDAQLILSYYK HLLKLPQQFFDTMRVGEIISRINDAVKIRTFLNDVSINFLVNLFIVFFSFVMMFTYYWKLALIMLSVIPVYLVVYVLTNK LNKKAQRKLMEDSAELESQLVESLNAIGTIKRFGLENHANEKTESRFVKLLHTGYSSNLNSVFSGTSAELISRLLTIVLL WIGAGFVLDNMLTPGELLSFYTLIGYFTGPISALIGMNKTLQDAIIASDRLFEIMDLERENDENQIELSPEQIGDIRFEQ VSFRYGTRINVFEDLNLSIPKGKFTAIVGESGSGKSTLMAILQNIYPIQKGNISIGKYDLKYIRTASLRQIIAVVPQKID LFAGNVVDNIAIGDHEPDMQRILDIAEQLGILDFIETLPRGFQTYLGENGTTLSGGQRQRIAIARALYRQPEILILDEAT SSLDSASEQYVQKAINLLKTCNKTVIVIAHRLSTLNHADKIIVLDKGKVLEEGTHKELLYKADSAYANLWKLQMPQLLVK N |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| CPR_1082 | YP_698404.1 | bacteriocin ABC transporter ATP-binding/permease | Virulence | Not named | Protein | 3e-128 | 41 |
