Gene Information

Name : Phep_0004 (Phep_0004)
Accession : YP_003090292.1
Strain : Pedobacter heparinus DSM 2366
Genome accession: NC_013061
Putative virulence/resistance : Unknown
Product : DNA-binding cold-shock protein
Function : -
COG functional category : K : Transcription
COG ID : COG1278
EC number : -
Position : 3200 - 3391 bp
Length : 192 bp
Strand : +
Note : PFAM: 'Cold-shock' DNA-binding domain

DNA sequence :
ATGCAAGAAGGAACAGTAAAATTTTTTAATGTAACTAAAGGTTTCGGTTTTATTATCCCAGCTAATGGAGATAGCGAAAT
TTTTGTACATTCAACAGGCCTTATCGACGAAATTCGTGAAAACGACAAAGTTGAATATGACGTTGAAAGCGGCAAAAAAG
GGTTGAATGCGATTAATGTTAAAGTAATCTAG

Protein sequence :
MQEGTVKFFNVTKGFGFIIPANGDSEIFVHSTGLIDEIRENDKVEYDVESGKKGLNAINVKVI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAO18076.1 unknown Not tested TTSS locus Protein 2e-07 41