Gene Information

Name : Afer_1060 (Afer_1060)
Accession : YP_003109668.1
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Resistance
Product : ABC transporter-like protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 1098295 - 1098987 bp
Length : 693 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3233 ABC-transporter ATP- binding protein

DNA sequence :
GTGAGCGAGCCCTTCGAGCTCGTCCTCGAGCCGATCGTGGTGCGACGGGGGCGAGGATCCATCCTCGAGCTTCCCGAACT
TGCGCTCGCATCCGGTGAGCTCACGGCGATCATCGGACCGTCGGGGTCTGGGAAGACCACGCTCCTCCACGTCCTCGCAC
GCATTCTCGAACCCGACGAGGGGCGCGTCCTCTGGCGCGATGCACACGGCGATCACCGACTGCGCCGCCGCCAGAGCGTC
CTCGTACCGCAAGCATTCGGACTGGTTGCTGCGCTCACCGTCGCAGAGAACATCGCGCTGGCGCTCAAGCTCCGCGGTGA
ACGCGCCTCGGATCGTTCCCCGCTGGTACGAGACGCGCTCGCCTCGGTCGGGCTCGACGGGCTGGCGAACCGACTGGTCG
GTGAGTTGTCGGGCGGCCAGCAGCAGCGTGTTGCGGTCGCCCGAGCATTGGCCGTCGACAGCCCTATCCTGATCGCCGAC
GAGCCGACCAGCGAGCTCGACCCCGACAACCGTGCGCTCGTGCTCGATCTCCTTCTCGAGCGAGCGCGCAGCGGTCCACT
CGTCGTCCTGGCTTCCCATGATCCGCTCGTCGCCGAGCGTGCCCACCGAACACTGGAACTCGCCGAGGGTCGACTCGTCG
ACGATCGCTGGACCCCCGAGAGCCAACGCAACGGAAGCCCTGAGCAGCCGTGA

Protein sequence :
MSEPFELVLEPIVVRRGRGSILELPELALASGELTAIIGPSGSGKTTLLHVLARILEPDEGRVLWRDAHGDHRLRRRQSV
LVPQAFGLVAALTVAENIALALKLRGERASDRSPLVRDALASVGLDGLANRLVGELSGGQQQRVAVARALAVDSPILIAD
EPTSELDPDNRALVLDLLLERARSGPLVVLASHDPLVAERAHRTLELAEGRLVDDRWTPESQRNGSPEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 9e-19 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Afer_1060 YP_003109668.1 ABC transporter-like protein NC_012469.1.7686946. Protein 7e-22 41