Gene Information

Name : Afer_R0023 (Afer_R0023)
Accession : -
Strain : Acidimicrobium ferrooxidans DSM 10331
Genome accession: NC_013124
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1117010 - 1118507 bp
Length : 1498 bp
Strand : -
Note : RNAmmer 1.2, Lagesen et al., Nucleic Acids Res. Apr2 2, 2007

DNA sequence : 
AGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCCTAACACATGCAAGTCGTACGCGGTGGCTTGCCACCGAGT
GGCGAACGGGTGCGTAACACGTGAGGAACCCACCCCGACGTGGGGGATAACACCGGGAAACCGGTGCTAATACCGCATGT
GCTCCCCTGACCGCATGGTCGAGGGAGCAAAGCCTTCGGGCGCGACGGGACGGCCTCGCGGCCTATCAGCTTGTTGGTGG
GGTAACGGCCCACCAAGGCGACGACGGGTAGCTGGTCTGAGAGGACGATCAGCCACACTGGGACTGAGACACGGCCCAGA
CTCCTACGGGAGGCAGCAGTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCAACGCCGCGTGGAGGACGAAGGC
CTTCGGGTTGTAAACTCCTTTCAGCAGGGACGAAACTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCA
GCCGCGGTAAGACGTAGGGGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCTCGTAGGCGGCTTGGCAAGTCGGAT
GTGAAATCACCAGGCTCAACCTGGTGTCGCCATCCGATACTGCCATGGCTTGAGTCCGGTAGAGGATCGTGGAATTCCTG
GTGTAGCGGTGAAATGCGCAGATATCAGGAGGAACACCAATGGCGAAGGCAGCGATCTGGGCCGGTACTGACGCTGAGGA
GCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCCTAAACGTTGGGCACTAGGTGTGGGGCCTCA
TTCGACGGGCTCCGTGCCGACGCTAACGCATTAAGTGCCCCGCCTGGGGAGTACGGCCGCAAGGCTAAAACTCAAAGGAA
TTGACGGGGGCCCGCACAAGCGGCGGAGCATGCGGCTTAATTCGATGCAACGCGAAGAACCTCACCTGGGCTTGACATGG
AGGGAAAAGCCGCAGAGATGCGGTGTCCTTCGGGGCCCTTCACAGGTGGTGCATGGCTGTCGTCAGCTCGTGTCGTGAGA
TGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGCCCTATGTTGCCAGCGGGTCATGCCGGGGACTCGTAGGGGACTGC
CGGAGTTAATTCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTACGTCCAGGGCTGCACGCATGCTACAATG
GCCGGTACAAAGGGTCGCCAACCCGCGAGGGGGAGCCAATCCCAAAAAACCGGTCTCAGTTCGGATCGCAGTCTGCAACT
CGACTGCGTGAAGTCGGAGTCGCTAGTAATCCCGGATCAGCACGCCGGGGTGAATACGTTCCCGGGCCTTGTACACACCG
CCCGTCACACCACGAAAGTCGGCAACACCCGAAGCCGGTGGCCCAACCCGCAAGGGAGGGAGCCGTCGAAGGTGGGGTCG
GCGATTGGGGTGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACCT

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-142 85.7
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-142 85.7
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-142 85.2
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-142 85.2