Gene Information

Name : Caci_0546 (Caci_0546)
Accession : YP_003111325.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Unknown
Product : class V aminotransferase
Function : -
COG functional category : E : Amino acid transport and metabolism
COG ID : COG1104
EC number : -
Position : 630102 - 631304 bp
Length : 1203 bp
Strand : +
Note : PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: afe:Lferr_0188 aminotransferase class V

DNA sequence :
ATGACCCTACGCACTTCTCCGCCCCATCCCGGGCTGGCCGGCGGGCCGGTCTACCTGGACTACAACGCCACGACCCCCGT
TGACCCACGCGTCGCGGACGCGATGGTGCCCCACCTCACGTATCTGTTCGGCAATCCGTCCAGCAGCCATGCCTACGGCG
CCGGGCCCAGGACGGCGATGCAGCGGGCGCGCGGGCAGGTTGCAGCCGTGATCGGTGCTCGGTCGGAGGGGGAGATCGTG
TTCACTGGGTCGGGTTCGGAGGCTGACCTGCTCGCGCTGCGCGGTGCAGTTCTGGCCGCGGGGGGCCCGCGCCCGCATGT
AATAACTCAGGTTACAGAACACCCGGCGGTTCTGGAGACGTGCAGCGCGCTCGAGCGCCTGCACGGGGCGCAGGTCACGG
TGCTGCCGGTCGACGGGTACGGAATGCTCGAGCCGAGCACACTGGCCGCCGCCCTGGAGCGGCCGACTGCTCTGGTATCG
GTCATGGCCGCCAACAACGAGACTGGCGCGTTGCAACCGATCGCCGAACTGGCCGCGCTCGCCCACGCACGTGGGGCGTT
GTTCCACTGCGACGCGGCTCAAGCCGTTGGGAAGATCGCGCTCGACGTGCGTGCCCTGGGGGTGGATCTCCTCACCATTG
TCGGACACAAGATGTATGCGCCTAAGGGTGTCGCCGCGCTGTACGTGAGGGAAGGCGTCAGGTTGGAACCGGTCGTCTAC
GGCGGCGGCCAGGAACGTGCACTGCGATCCGGCACCGAGAGCGTTGCCCTGGCCGTGGCTCTCGGTGCCGCGGCCGAGCT
TGTGGTCGAGGACCTCGCGCATAACGAGCCCGCTCGTGTCGCCGCTCTGCGCGATGAGTTGCACCGGCTTCTGACCGCCG
GTTGGCCGGGCCGTGTCCGCCTCAACGGCCCTGACGCGGCCCGCCTGCCGAACACGCTTAATGTCAGCATTGACGGGGTC
CGCGGGTACGAAATGCTCGCTTCCGTGCCTGACGTTGCGGCGTCCACCGGTTCGGCCTGCCACAGCGGCGACCACACCAC
CCCATCGGCTGTCCTGACTGCCATGGGCTTCGACGAAGACCGTGCGTTGGGGTCCGTCCGCCTCTCACTGGGGCGCTGGA
GTACTCGGCGAGAGGTTGAGAAGGCGGCGCGCGCGCTAATCGGGCATAAGTTGCCAAATAGGGATGAAGCTCCGCCACGA
TAG

Protein sequence :
MTLRTSPPHPGLAGGPVYLDYNATTPVDPRVADAMVPHLTYLFGNPSSSHAYGAGPRTAMQRARGQVAAVIGARSEGEIV
FTGSGSEADLLALRGAVLAAGGPRPHVITQVTEHPAVLETCSALERLHGAQVTVLPVDGYGMLEPSTLAAALERPTALVS
VMAANNETGALQPIAELAALAHARGALFHCDAAQAVGKIALDVRALGVDLLTIVGHKMYAPKGVAALYVREGVRLEPVVY
GGGQERALRSGTESVALAVALGAAAELVVEDLAHNEPARVAALRDELHRLLTAGWPGRVRLNGPDAARLPNTLNVSIDGV
RGYEMLASVPDVAASTGSACHSGDHTTPSAVLTAMGFDEDRALGSVRLSLGRWSTRREVEKAARALIGHKLPNRDEAPPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96060.1 cysteine desulfurase Not tested T-PAI Protein 1e-41 41