Gene Information

Name : Caci_8342 (Caci_8342)
Accession : YP_003119006.1
Strain : Catenulispora acidiphila DSM 44928
Genome accession: NC_013131
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 9666627 - 9667331 bp
Length : 705 bp
Strand : -
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: kra:Krad_1869 ABC transporter-related protein

DNA sequence : 
ATGGCCTCCGACATTCCGAAGGCGCAGATAGAGGCAGTCGACGTCACCCGCTCCTACCGGATGGACGGGGTGTCCGTGGA
CGCCCTGCGCGGGGTCTCGCTGACCATCGAAGAGGGCGACTACGCGGCGATCATCGGACCGTCGGGCTCCGGGAAGTCCA
CGCTGATGCACCTGCTCGGCTGTCTGGACCGGCCGACGTCCGGCACGCTCCTGGTCCGGGGACGCGACGTGAGCTCCCTG
GACGACAGCGAGCTGGCCGAACTCAGGAACCAGACGATCGGTTTCGTCTTCCAGTCCTTCCAGCTGCTGGCGCGTACTAC
CGCTCTAGAGAACGTCGCACTCCCGCTCGTCTATAGAGGAGTGCGCAGAGCGGAACGCAGAAAGCGCGCCGCCGAGGCAC
TGGAAGCCGTGAACTTGGGGCATCGCCTAGGGCACCGCCCCACGCAGATGTCCGGTGGGGAACAGCAGCGGGTTGCTATA
GCGCGCGCTCTAGTAGGGGAACCCGCAGTGCTTCTCGCGGACGAACCCACAGGGAACCTCGACACCGTCAACGGCGACGA
GGTGATGGGCATCCTGGAGCGACTCAACAAGGAACGCGGAGTAGCGGTGGTCCTGGTGACCCATGAAGCAGACATCGCTG
CCCGTGCACAACGGATCATCCGTGTGCGGGACGGTCTCATCGAGGAAGCGCCGGTGTCCTCATGA

Protein sequence : 
MASDIPKAQIEAVDVTRSYRMDGVSVDALRGVSLTIEEGDYAAIIGPSGSGKSTLMHLLGCLDRPTSGTLLVRGRDVSSL
DDSELAELRNQTIGFVFQSFQLLARTTALENVALPLVYRGVRRAERRKRAAEALEAVNLGHRLGHRPTQMSGGEQQRVAI
ARALVGEPAVLLADEPTGNLDTVNGDEVMGILERLNKERGVAVVLVTHEADIAARAQRIIRVRDGLIEEAPVSS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 4e-30 48

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Caci_8342 YP_003119006.1 ABC transporter NC_008702.1.4606598. Protein 9e-38 54
Caci_8342 YP_003119006.1 ABC transporter NC_012469.1.7686878. Protein 4e-46 52
Caci_8342 YP_003119006.1 ABC transporter CP001581.1.gene798.p Protein 8e-34 42
Caci_8342 YP_003119006.1 ABC transporter CP001581.1.gene598.p Protein 3e-38 41
Caci_8342 YP_003119006.1 ABC transporter NC_012469.1.7686946. Protein 3e-20 41