Gene Information

Name : Svir_05560 (Svir_05560)
Accession : -
Strain : Saccharomonospora viridis DSM 43017
Genome accession: NC_013159
Putative virulence/resistance : Unknown
Product : 16S ribosomal RNA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 564225 - 565751 bp
Length : 1527 bp
Strand : +
Note : -

DNA sequence : 
CATTGTTGGAGAGTTTGATCCTGGCTCAGGACGAACGCTGGCGGCGTGCTTAACACATGCAAGTCGAACGCTGAAGCCGT
CTTCGGGCGGTGGATGAGTGGCGAACGGGTGAGTAACACGTGGGTAATCTGCCCTGTACTCTGGGATAAGCCTGGGAAAC
TGGGTCTAATACCGGATAGGACACGCTACCGCATGGTGGTGTGTGGAAAGCTTCGGCGGTACAGGATGAGCCCGCGGCCT
ATCAGCTAGTTGGTGGGGTGATGGCCTACCAAGGCGACGACGGGTAGCCGGCCTGAGAGGGTGACCGGCCACACTGGGAC
TGAGACACGGCCCAGACTCCTACGGGAGGCAGCAGTGGGGAATATTGCACAATGGGCGGAAGCCTGATGCAGCGACGCCG
CGTGGGGGATGACGGCCTTCGGGTTGTAAACCCCTTTCGCCCGGGACGAAGCGAGAGTGACGGTACCGGGAGAAGAAGCA
CCGGCCAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGT
AGGCGGTGTGTCGCGTCTGCCGTGAAAACCTGCGGCTTAACCGTGGGCGTGCGGTGGATACGGGCACACTTGAGTTCGGT
AGGGGAGACTGGAATTCCTGGTGTAGCGGTGGAATGCGCAGATATCAGGAGGAACACCAGTGGCGAAGGCGGGTCTCTGG
GCCGAAACTGACGCTGAGGAGCGAAAGCGTGGGGAGCGAACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGGTGG
GCGCTAGGTGTGGGATGCTGTTCACGTGTCCCGTGCCGTAGCTAACGCATTAAGCGCCCCGCCTGGGGAGTACGGCCGCA
AGGCTAAAACTCAAAGGAATTGACGGGGGCCCGCACAAGCGGCGGAGCATGTGGATTAATTCGATGCAACGCGAAGAACC
TTACCTGGGTTTGACATGCACTGGACCGGCGTAGAGATACGCCTTCCCTTGTGGCTGGTGCACAGGTGGTGCATGGCTGT
CGTCAGCTCGTGTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTGTCCCATGTTGCCAGCGGGTAATGCC
GGGGACTCGTGGGAGACTGCCGGGGTCAACTCGGAGGAAGGTGGGGACGACGTCAAGTCATCATGCCCCTTATGCCCAGG
GCTTCACACATGCTACAATGGCCAGTACAGAGGGTTGCGAGACCGTGAGGTGGAGCGAATCCCTTAAAGCTGGTCTCAGT
TCGGATCGTAGTCTGCAACTCGACTACGTGAAGTCGGAGTCGCTAGTAATCGCAGATCAGCAACGCTGCGGTGAATACGT
TCCCGGGCCTTGTACACACCGCCCGTCACGTCATGAAAGTCGGTAACACCCGAAGCCCATGGCCTAACCCCGTCAGGGGA
GGGAGTGGTCGAAGGTGGGACCGGCGATTGGGACGAAGTCGTAACAAGGTAGCCGTACCGGAAGGTGCGGCTGGATCACC
TCCTTTC

Protein sequence : 
-

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
FTM_1085 - 16S ribosomal RNA Not tested FPI DNA e-122 86.6
FTM_1695 - 16S ribosomal RNA Not tested FPI DNA e-122 86.6
FTT_r07 - 16S ribosomal RNA Not tested FPI DNA e-122 86.5
FTT_r10 - 16S ribosomal RNA Not tested FPI DNA e-122 86.5
FTW_2070 - 16S ribosomal RNA Not tested FPI DNA e-122 86.4
FTW_2069 - 16S ribosomal RNA Not tested FPI DNA e-122 86.4