Gene Information

Name : Shel_01810 (Shel_01810)
Accession : YP_003142601.1
Strain : Slackia heliotrinireducens DSM 20476
Genome accession: NC_013165
Putative virulence/resistance : Resistance
Product : antimicrobial peptide ABC transporter ATPase
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 222128 - 222838 bp
Length : 711 bp
Strand : +
Note : PFAM: ABC transporter

DNA sequence : 
ATGAACGGCAACGAGTATTTGGTTGTCAACAACCTTTGTAAGCATTACGGCGAAGGCGATGCTCGGATCACGGTTCTCCA
GGGCTTCGAGACCACCATCAACCGCGGCGAGATCTGCGTGCTTCTGGGCCCTTCCGGCTCGGGCAAATCCACGTTTCTGA
ACCTGGTCGGCGGATTGGAGCCAGCCGATGAGGGGAACATCGTCGTGAACGGCGTGGACATCACGACCCTGAACGACCAT
GACCTGGTAGAATACCGCCGTCGAGAACTGGGCTTCGTGTTCCAGTTCTACAACCTGGTGCCCGACTTGACGGTGCAGGA
GAACATCGAGGTCACGCAGGTCTTGAGCAGGAACCCGCTTCCCATGGAGCCCCTCCTGAAATCGCTGGGCCTGTGGGAGC
ACCGCCGCAAATTCCCCAACCAGATATCCGGCGGCCAGCAGCAACGCTGCGCCATCGGTCGCGCGTTGGTGAAGGCGCCC
GGTCTGCTGCTGTGCGACGAGCCCACCGGCGCTCTGGACTACAACACCTCCAAGGAGATTCTGGAGCTGTTCGAACAGGT
CAATCGCGAATATGGCTGCACCATCGTCATCGTGACCCACAACGACGCCATCAAGCACATGTCCCATCGCATCCTGCGCC
TGCACGACGGGCGCCTCATCGAGGACCGCGTTAACGACGCCATCATGCCCGCCCGCGAACTCGCCTGGTAG

Protein sequence : 
MNGNEYLVVNNLCKHYGEGDARITVLQGFETTINRGEICVLLGPSGSGKSTFLNLVGGLEPADEGNIVVNGVDITTLNDH
DLVEYRRRELGFVFQFYNLVPDLTVQENIEVTQVLSRNPLPMEPLLKSLGLWEHRRKFPNQISGGQQQRCAIGRALVKAP
GLLLCDEPTGALDYNTSKEILELFEQVNREYGCTIVIVTHNDAIKHMSHRILRLHDGRLIEDRVNDAIMPARELAW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Shel_01810 YP_003142601.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene798.p Protein 7e-43 43
Shel_01810 YP_003142601.1 antimicrobial peptide ABC transporter ATPase NC_012469.1.7685735. Protein 5e-48 43
Shel_01810 YP_003142601.1 antimicrobial peptide ABC transporter ATPase CP001581.1.gene598.p Protein 3e-41 41