|
Name : Shel_09030 (Shel_09030) Accession : YP_003143296.1 Strain : Slackia heliotrinireducens DSM 20476 Genome accession: NC_013165 Putative virulence/resistance : Unknown Product : transketolase subunit A Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG3959 EC number : - Position : 1045912 - 1046748 bp Length : 837 bp Strand : + Note : PFAM: Transketolase, thiamine diphosphate binding domain DNA sequence : GTGGACTTGAGAGAGTTAGAGGCCAAGGCCTTGGACCTGCGGGTGGATATCATCACCATGCTCGAGCAGGCCAAGAGCGG CCATCCGGGCGGATCGCTGTCCGCGGCCGACATCATGACGGCATTGTATTTCGGCGGCATTATGAACCACGATCCGAACA ACCCGACCAAGGAAGACCGTGACAGGTTCGTGTTGTCCAAAGGCCACGCAGCGCCAGCGCTGTACGCCGCATTGGCCGAG GCGGGGTATTTCCCGAAAGAAGAGCTGGTGACATTGCGCAAGCTTGGCAGCAAGCTGCAGGGCCATCCCGATTGCAAGAA ACTTGCCGGCGTTGAGGTTTCGACCGGTTCTCTGGGCCAGGGCCTGTCCATCGCGGCAGGCATGGCATGCGGTCTGAAGC TCAAGGGCGCCGAGCAGACCGTGTACACGCTTTTGGGCGACGGCGAATGCCAAGAGGGCCAGGTCTGGGAGGCGGCAATG TTTTCCGCCCATCGCAACCTGGACAACCTGGTGGCTATCGTCGACCACAACAAGCTGCAAATCGACGGCAACATCGAAGA CGTGTGCTCGCCTGAAGATCTGGGCGACAAGTTCCGTGCTTTCGGCTGGCAGGTGTTCGTCTGCGACGGCAACGACATGG AAGCCGTCATGGACACGCTGACCTCGGCCAGGGGAATCCATTGCGGAAAGCCCAAGGCGGTCATCGCGGAAACCACGAAG GGCAAGGGCGTTTCGTTCATGGAAGGCCAGGCAGGATGGCACGGCAAGGCTCCCAACGCCGAGCAGTCCGCCCAAGCCGT TGCAGAGCTTACCGGCAAGGAGGTCGAACATGTCTAA Protein sequence : MDLRELEAKALDLRVDIITMLEQAKSGHPGGSLSAADIMTALYFGGIMNHDPNNPTKEDRDRFVLSKGHAAPALYAALAE AGYFPKEELVTLRKLGSKLQGHPDCKKLAGVEVSTGSLGQGLSIAAGMACGLKLKGAEQTVYTLLGDGECQEGQVWEAAM FSAHRNLDNLVAIVDHNKLQIDGNIEDVCSPEDLGDKFRAFGWQVFVCDGNDMEAVMDTLTSARGIHCGKPKAVIAETTK GKGVSFMEGQAGWHGKAPNAEQSAQAVAELTGKEVEHV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96177.1 | transketolase | Not tested | T-PAI | Protein | 2e-32 | 43 |
| unnamed | AAT96229.1 | transketolase | Not tested | T-PAI | Protein | 7e-33 | 43 |
| unnamed | AAT96117.1 | transketolase | Not tested | T-PAI | Protein | 6e-33 | 43 |
| unnamed | AAT96056.1 | transketolase | Not tested | T-PAI | Protein | 2e-33 | 43 |
| unnamed | AAT96100.1 | transketolase | Not tested | T-PAI | Protein | 1e-32 | 42 |
