Gene Information

Name : Kkor_1509 (Kkor_1509)
Accession : YP_003146689.1
Strain : Kangiella koreensis DSM 16069
Genome accession: NC_013166
Putative virulence/resistance : Unknown
Product : TrmH family RNA methyltransferase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0565
EC number : -
Position : 1620812 - 1621645 bp
Length : 834 bp
Strand : -
Note : TIGRFAM: RNA methyltransferase, TrmH family, group 1; PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: pfl:PFL_4968 RNA methyltransferase

DNA sequence :
ATGAGTAATTCCACGCCTCAAGAGCCACAATTTGATCCGCAACTACTAGATAGCATTAAGATAGTACTTTGCCAGACTAG
CCACCCGGGTAATATCGGCGCGGCAGCTCGCGCTATGAAAACTATGGGCTTGAAGCACCTGGTTCTGGTTAAACCTAAAG
ATTACCCATCTGAAGAAGCTATGGTTCGTTCATCCGGCGCTTTAGACGTTCTTGAGAATGCACAGGTTGTTGACACTGTT
GAGGAGGCTTTGGCCGATTGCAGACTAATCATCGGTACTAGCTCTCGTAATCGCGCCTTGCCATGGCCACTGATTGAGCC
GCGGGAAATGGGGGAGCTGATAAAAGAACACGTTGAAGCACGTCCTGTGGCCATTATGTTTGGTCGTGAAAGCACCGGTT
TGCTTAATGAAGAGTTACAGCTGTGTCACTACCACGTCAATATTCCAGCCAATCCGGAGTACATGTCACTGAACCTTGCT
TCGGCGGTTCAGCTTATTGCCTATGAAATAAGATTGGCCAGTAAAATGATAGCCGAAATAGTTAGGAAAGATTCACAGCC
TGTTGATGCTGAGCTAGGTTATGATGCACAAGCTGAGTCAGAGCATGACAAAGAGAGTGAACAGTTGGCCAGTTTTGAAG
AAGTTGATGGGCTTTATAACCATCTAGAATCCACTATGAACAAAACGGAATTCTACAACCCCGAGCAACCTAAATTATTA
CCTGCTAGAATACGCAGGATTTTAGCAAAGGCTCGCCTTAATAAAGGTGAGGTCAATATTTTACGAGGGTTTCTATCCTC
TATCGATAAGTATATAAAGCGGCATGTAAAGTAA

Protein sequence :
MSNSTPQEPQFDPQLLDSIKIVLCQTSHPGNIGAAARAMKTMGLKHLVLVKPKDYPSEEAMVRSSGALDVLENAQVVDTV
EEALADCRLIIGTSSRNRALPWPLIEPREMGELIKEHVEARPVAIMFGRESTGLLNEELQLCHYHVNIPANPEYMSLNLA
SAVQLIAYEIRLASKMIAEIVRKDSQPVDAELGYDAQAESEHDKESEQLASFEEVDGLYNHLESTMNKTEFYNPEQPKLL
PARIRRILAKARLNKGEVNILRGFLSSIDKYIKRHVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAT96063.1 group 1 trmH family protein Not tested T-PAI Protein 4e-54 48