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Name : Kkor_0430 (Kkor_0430) Accession : YP_003145618.1 Strain : Kangiella koreensis DSM 16069 Genome accession: NC_013166 Putative virulence/resistance : Unknown Product : DNA-directed RNA polymerase subunit beta Function : - COG functional category : K : Transcription COG ID : COG0085 EC number : - Position : 450448 - 454515 bp Length : 4068 bp Strand : + Note : TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; KEGG: cja:CJA_0692 DNA-directed RNA polymerase, DNA sequence : ATGGCATATTCATACACTGAGAAAAAGCGAATCCGTAAGGATTTTGGTCGACGTTCCAATATTCTCGATGTGCCTTATCT TTTGGCAATCCAAAAAGATTCATACCGTGAATTTCTTGAGCCAAGAGGCGATGAAGATTCAGGTTTGGACTCAGCGTTCA AGTCTATTTTCGCAATTGAAAGTTATTCAGGTAACGCCGCATTAGAATACGTCGGATATTCATTGGGCGAACCTGTCTTT AATGTTAAAGAATGTCAAATTCGTGGCATAACCTATGCTGCACCACTTCGCGTCAAAATTCGCTTGGTCATCTATGATAA AGACTCTAAGACCAAAAAAGTAAAAGATATTCGCGAACAAGAAGTATTCATGGGTGAACTACCGTTAATGACAGAAAACG GTACCTTCGTAATTAACGGTACTGAGCGTGTTATTGTGTCTCAGTTACACCGTAGTCCTGGTGTGTTCTTCGACTCAGAT CGAGGTAAAACACACAGCTCAGGTAAGCTACTTTATCAAGCTCGCGTTATACCTTACCGTGGTTCATGGTTGGATTTCGA ATTTGATCCAAAAGATATGCTTTATGTGCGAATCGACCGTCGCCGTAAACTGCCTGCTTCGATTATTCTTCGTTCTTTGG GTTACAACACCCAGGACATGCTTGACATGTTCTTCGAGCGTAATAATTTCTACATCACTAAGAAAGGCGAGGTTCAGCTT GAGCTGATCCCATCACGCTTACGTGGTGAAACGGCTACTTTTGAAATCAAAGCTAAGGGTAAAGTTGTTGTAGAAGAAGG TCGTCGTATTACACCTCGACATATTGCACAACTTGAAAAAGCTGGTGTTAAAAAGCTAGACGTTCCAACGGAGTATATCT ACGGCCGCGCATTAGCTACTGACATTATCGATAAAGAGTCGGGCGAAATTATTGCTGAAGCAAACGCAGAGATTACCGAA GAAATTCTAGAAAAGATGATTGAGTCTGGTGTAACTGAAGTTCCTACACTTTACACCAACGATCTCGATCATGGCCCATA TATGTCAGATACATTGCGTATCGACTCAACCCGTACTCCACTTGAGGCGAAAGTTGAAATCTATCGCATGATGCGTCCTG GCGAACCGCCAACGCAAGATGCGGCAGAAGCATTATTTGAAAACCTATTCTTCAACCTTGAGCGTTATGACCTATCTCGC GTTGGTCGTATGAAGTTCAATCGTCGCGTTGGTCGTGATGAGATTGAAGGTGAGGGAACACTTTCCAACCAAGATATTAT TGATGTCATTAAAACATTGATCGAAATTCGTAACGGTAGTGGTACAGTAGATGATATTGACCACTTAGGTAACCGTCGTA TTCGTTGTGTTGGCGAAATGGCAGAAAACCAATTCCGTGTTGGTTTAGTTCGTGTTGAGCGTGCTGTTAAAGAACGTCTG TCCCAAGCAGAAAGTGAAAACTTGATGCCGCAAGACCTTATCAACGCAAAACCAGTTTCTGCTGCAGTTAAAGAATTCTT TGGCTCAAGTCAGTTGTCTCAGTTTATGGATCAAAATAATCCATTATCTGAAATTACTCACAAACGTCGAGTTTCGGCAT TAGGCCCTGGTGGTTTGACGCGTGAGCGCGCGGGCTTTGAGGTTCGTGACGTACACCCAACTCACTATGGTCGTGTGTGT CCGATTGAAACACCGGAAGGTCCAAACATTGGTTTGATTAACTCTTTGGCATGTTATGCCAGAACCAACCAGTATGGTTT CCTTGAAACACCATATCGTCGTGTTGCTGATGGTAAGCCTACTGCCGATGTGGATTATTTGTCTGCGATTGATGAAGGCA AATTTGTCATTGCACAGGCAAACGCCAACCTGGATAAGAACGGAACCTTCTCAGATGATTTGGTACCTTCTCGATTCCAG GGTGAGTTTATGTTGGCCACGCCAGATCAGGTTCAATATATGGATGTTTCACCGCAGCAGATCGTATCAGTTGCAGCGAG TATGATTCCATTCCTTGAGCACGATGATGCGAACCGTGCATTAATGGGTTCAAACATGCAGCGTCAGGCAGTTCCAACTT TGCGTGCTGAAAAACCACTTGTTGGTACCGGCATGGAAAGAACAGTAGCTGTCGATTCAGGTGTGGTTGTAGCAGCAAAG CGCGGTGGTGTTGTTGATCAAGTCGATGCCAGCCGAGTAGTAATTCGTGTAAATGAAGATGAAGTGGGTGATAACGACTC AGGTGTAGATATTTACAACTTCACCAAGTACACGCGCTCAAACCAAAACACTTGTATCAATCAGCGTCCAATCGTTAAGC AAGGCGACATCGTTGCTCGCGGTGACGTTCTGGCTGATGGCCCATCTACAGACTTGGGTGAGTTAGCGCTTGGTCAGAAT ATGCGCGTAGCATTTATGCCTTGGAATGGTTACAACTTTGAGGATTCGATCCTTATCTCAGAGAATGTGGTGCAGGAAGA TCGCTTCACCAGTATCCATATTCAGGAATTAACCTGTATCTCTCGTGATACTAAGTTGGGACCTGAAGAAATTACAGCTG ATATTCCAAACGTTGGCGAAAGCGCACTAAGCAAACTGGATGAATCAGGTATTGTTTATATAGGTGCTGAAGTAAAACCA GGCGATATTCTGGTTGGTAAAGTAACACCAAAAGGCGAAACGCAATTAACTCCAGAAGAGAAGTTATTGAGAGCCATCTT TGGTGAGAAAGCTTCAGACGTTAAAGATACTTCGTTGCGCGTCGGTACCTCAACTCACGGAACGGTTATTGACGTTCAAG TCTTTACTCGTGACGGCGTTGAGAAAGATGCTCGTGCAAAAGAAATCGAGAATGCTGAAGTCGCTAGCGCTAAGAAAGAT TTAAATGATGAGTTCCGTATCTTGGCAGATAGTATTTACCAGCGTGCGCGTAACCTTGTTATGGGTTGTGTTGGTGAGAA GGGGCCAAATAAATTCAAGAAAGGCAGCAAAATCACTGTTGACTACTTGGATGAGCTTGAGCCTTCACAGTATCTAGAAA TTCAGTTGCGAGTTGAGGAAAAACAACAAGCCCTTGAAAGTCTGGCTAACTATCTTGCTGAACAGCGCAAAGAGTATGAC AAGAAGTTTGAAGTCCAGAAGCTTAAAATCACTCAAGGTGATGATTTGGCTCCAGGCGTTCAGAAAATCGTTAAAGTTTA CTTGGCGGTTAAACGTCGTATTCAGCCTGGTGACAAGATGGCGGGGCGTCACGGTAACAAAGGTGTTATTTCAACTATTG TTCCGATTGAAGATATGCCATATGACGAAAATGGTGAGCCAGTGGATATCGTATTGAACCCGCTGGGCGTACCTTCACGT ATGAACATCGGTCAGATTCTTGAAACCCACTTAGGCTGGGCCGCAAAAGGTGTCGGCACTAAAATTGGTGAGTTGTTGGA TACTGGCAAAGCACCTAAGACTGTTCGCACATTCTTGAATAAAGTTTATAACCATCGTGATGACAAGACTGTTGATTTGT CAGAAATGACGGATGATGAAGTTATGACAATGGCTGGTAACCTTCGTTTTGGCGTGCCAATGGGCACACCAGTATTCGAT GGTGCAACGGAAGAAGACATTCATGCAATGTTTGATTTGGCTGAGTTACCTAAATCAGGCCAAACCTGGTTGTACGATGG ACGAACTGGTGATCGCTTCGAGCGTCCAGTGACCGTTGGTTATATGTATATGCTGAAGCTGAATCACTTGGTTGATGACA AGATGCACGCCCGTTCTACCGGTTCGTACAGCTTGGTTACACAGCAACCACTAGGCGGTAAAGCGCAATTCGGTGGTCAA CGTTTCGGTGAGATGGAGGTGTGGGCACTGGAAGCTTACGGTGCTGCTTATACCTTGCAAGAGATGCTCACAGTTAAATC GGATGATGTGAATGGTCGTACCCGCATGTATAAAAACATTGTGGATGGTGATCATCGCATGGAGCCGGGTATGCCAGAGT CATTCAACGTATTGACTAAGGAAATCCGCTCATTAGCGATTAACATTGAGCTTGAGCACGAAGATTAA Protein sequence : MAYSYTEKKRIRKDFGRRSNILDVPYLLAIQKDSYREFLEPRGDEDSGLDSAFKSIFAIESYSGNAALEYVGYSLGEPVF NVKECQIRGITYAAPLRVKIRLVIYDKDSKTKKVKDIREQEVFMGELPLMTENGTFVINGTERVIVSQLHRSPGVFFDSD RGKTHSSGKLLYQARVIPYRGSWLDFEFDPKDMLYVRIDRRRKLPASIILRSLGYNTQDMLDMFFERNNFYITKKGEVQL ELIPSRLRGETATFEIKAKGKVVVEEGRRITPRHIAQLEKAGVKKLDVPTEYIYGRALATDIIDKESGEIIAEANAEITE EILEKMIESGVTEVPTLYTNDLDHGPYMSDTLRIDSTRTPLEAKVEIYRMMRPGEPPTQDAAEALFENLFFNLERYDLSR VGRMKFNRRVGRDEIEGEGTLSNQDIIDVIKTLIEIRNGSGTVDDIDHLGNRRIRCVGEMAENQFRVGLVRVERAVKERL SQAESENLMPQDLINAKPVSAAVKEFFGSSQLSQFMDQNNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVC PIETPEGPNIGLINSLACYARTNQYGFLETPYRRVADGKPTADVDYLSAIDEGKFVIAQANANLDKNGTFSDDLVPSRFQ GEFMLATPDQVQYMDVSPQQIVSVAASMIPFLEHDDANRALMGSNMQRQAVPTLRAEKPLVGTGMERTVAVDSGVVVAAK RGGVVDQVDASRVVIRVNEDEVGDNDSGVDIYNFTKYTRSNQNTCINQRPIVKQGDIVARGDVLADGPSTDLGELALGQN MRVAFMPWNGYNFEDSILISENVVQEDRFTSIHIQELTCISRDTKLGPEEITADIPNVGESALSKLDESGIVYIGAEVKP GDILVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVGTSTHGTVIDVQVFTRDGVEKDARAKEIENAEVASAKKD LNDEFRILADSIYQRARNLVMGCVGEKGPNKFKKGSKITVDYLDELEPSQYLEIQLRVEEKQQALESLANYLAEQRKEYD KKFEVQKLKITQGDDLAPGVQKIVKVYLAVKRRIQPGDKMAGRHGNKGVISTIVPIEDMPYDENGEPVDIVLNPLGVPSR MNIGQILETHLGWAAKGVGTKIGELLDTGKAPKTVRTFLNKVYNHRDDKTVDLSEMTDDEVMTMAGNLRFGVPMGTPVFD GATEEDIHAMFDLAELPKSGQTWLYDGRTGDRFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGGKAQFGGQ RFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTRMYKNIVDGDHRMEPGMPESFNVLTKEIRSLAINIELEHED |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| BJAB07104_00346 | YP_008207811.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR25 | Protein | 0.0 | 70 |
| BJAB0868_00350 | YP_008211676.1 | DNA-directed RNA polymerase, beta subunit/140 kD subunit | Not tested | AbaR26 | Protein | 0.0 | 70 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP001138.1.gene4362. | Protein | 0.0 | 74 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_002695.1.914942.p | Protein | 0.0 | 74 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP000034.1.gene3741. | Protein | 0.0 | 74 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP004022.1.gene2794. | Protein | 0.0 | 73 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP001918.1.gene250.p | Protein | 0.0 | 73 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP000647.1.gene4402. | Protein | 0.0 | 73 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_002516.2.881699.p | Protein | 0.0 | 73 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP000675.2.gene392.p | Protein | 0.0 | 72 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_010400.5987325.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_010611.6233925.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_011595.7060572.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_009085.4918494.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_010410.6003841.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_011586.7046027.p0 | Protein | 0.0 | 70 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_008702.1.4609796. | Protein | 0.0 | 68 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | CP002695.1.gene18.p0 | Protein | 0.0 | 66 |
| Kkor_0430 | YP_003145618.1 | DNA-directed RNA polymerase subunit beta | NC_011035.1.6448762. | Protein | 0.0 | 65 |
