Gene Information

Name : Apre_0628 (Apre_0628)
Accession : YP_003152391.1
Strain : Anaerococcus prevotii DSM 20548
Genome accession: NC_013171
Putative virulence/resistance : Virulence
Product : lysyl-tRNA synthetase
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG1190
EC number : -
Position : 727033 - 728928 bp
Length : 1896 bp
Strand : +
Note : TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); t-RNA- binding domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: bar:GBAA0076 lysyl-tRNA synthetase

DNA sequence :
ATGGCTGATAACAAAGATTTAAATGAAATGCTACAAATTAAAAGAGACAAGCTGGAAGACCTTAAGAAAGAAGGAAGAGA
CCCTCACAAGGTCGTAAACTTTAAGGGTAGAATTGCTTCAAGCCTTATCAAAGATAACTTCGAAAAATATGATGGCGAAA
AAGTAAGAATTGCCGGAAGAATTATGGCCAAACGTGGACATGGAAACATGAGTTTCATGGACATCCAAGACGAAGAAGGT
CAAATCCAAATAGTAAACCGTAAAAATGTTATTGGCGATGAGTTCAAACAAGTTAAAAAATACGATATAGGCGATATCGT
AGGTATAGAAGGAAAAGTATTTAAGACAAATCAAGGAGAAATCTCAATTGAGACTGAAACTCCACTACTAATGACCAAAT
CTCTTCAAATGCTTCCTGAAAAATGGCATGGACTAAAGGACCCTGACCTAAGATATAGACAAAGATACTTAGACCTTATA
GTAAATCCAGAAGTAAAAAGCGTATTCGTTCAAAGAAGTCAAATCATATCAGAAATCAGGAGATTCCTAGACGGTCAAGG
CTTCCTAGAAGTTGAAACTCCAATCCTAAACACAATAGCAGGAGGAGCTACAGCTCGTCCATTTACAACTCATCATAATT
CTCTAAACATAGGTATGTACCTAAGAATTGCATCAGAGCTATATCTTAAGAGATTAATCGTAGGTGGATTTGACAGAGTT
TATGAAATCGGAAGAATGTTCAGAAATGAAGGAATGGATGCAACTCACAACCCTGAATTTACAACAATGGAACTCTACCA
AGCCTATGGAGATTTCGAAGACATGATGGAAATCACAGAAAATATGGTAGAACATGTTGCAAACAAAGTAAAGGGAACAA
CAGTTGTAGAATTTGATGGCAACGAGATTGAACTAAAGGCTCCTTGGAAGAGAATCTCAATGATAGATGCAGTTAAAGAG
CACTCTGGTGTAGACTTTAATGAAATCAAAACTGATGAAGAAGCAATCGCTATTGCTAAAGAAAAGGGAGTAGAAGTAAA
GGAAACAAGAGGCGAGATTATAGCAGAATTCTTTGATGAATTTGTTGAAGATAAACTTATCCAACCAACATTTATCGTTG
ACTATCCAGTAGAAATTTCACCACTTGCAAAAAGAAAGAACGATGATCCTTCCCTAACATATAGATTCGAAGCCTTCATC
AACGGTGCAGAAATAGCTAACGCCTTCTCAGAGCTAAACGATGCCCTAGATCAAAAACAAAGATTCCTTGATCAAGTTGC
TAAAAGAGAAGCAGGCGATGACGAAGCACAAATGATGGACTACGACTTCGTAAATGCCCTAGAAATAGGAATGCCTCCAA
CAGGCGGACTTGGTATAGGAATCGATAGACTAATCATGATCCTAACAGGCCAACACTCTATAAGAGACGTATTACTCTTC
CCAACAATGAAGCCAATAGGCCTTGAAAAGGAAGAAAATGATAAACAAAAGATCGATTCAATTGACCAAGAAGATGTAGA
AATTGACTTTTCTAAAGTACAAATCGAAGATATCTATGAAGATGTAGACTTTGATACCTTTAGCAAGTCAGACTTCAGAG
CTGTTAAGGTTAAAGATTGTGTAGAAGTACCAAAGAGCAAGAAGCTTTTACAATTTACTCTAGATGATGGAACTGGTGAG
GATAGAACAATCCTATCAGGAATAAAGGCCTACTATAACCCAGAGGACCTAATAGGAAGAACCCTACTTGCTATAGTAAA
CCTACCTGCAAGAAAGATGATGGGAGTAGAAAGCCAAGGAATGCTACTATCAGCAATCCACAAAGAAGAAGGCGAAGAAA
AACTAAACCTAATCATACTATCAAATAGAATACCTGCTGGAGCAAAATTATACTAA

Protein sequence :
MADNKDLNEMLQIKRDKLEDLKKEGRDPHKVVNFKGRIASSLIKDNFEKYDGEKVRIAGRIMAKRGHGNMSFMDIQDEEG
QIQIVNRKNVIGDEFKQVKKYDIGDIVGIEGKVFKTNQGEISIETETPLLMTKSLQMLPEKWHGLKDPDLRYRQRYLDLI
VNPEVKSVFVQRSQIISEIRRFLDGQGFLEVETPILNTIAGGATARPFTTHHNSLNIGMYLRIASELYLKRLIVGGFDRV
YEIGRMFRNEGMDATHNPEFTTMELYQAYGDFEDMMEITENMVEHVANKVKGTTVVEFDGNEIELKAPWKRISMIDAVKE
HSGVDFNEIKTDEEAIAIAKEKGVEVKETRGEIIAEFFDEFVEDKLIQPTFIVDYPVEISPLAKRKNDDPSLTYRFEAFI
NGAEIANAFSELNDALDQKQRFLDQVAKREAGDDEAQMMDYDFVNALEIGMPPTGGLGIGIDRLIMILTGQHSIRDVLLF
PTMKPIGLEKEENDKQKIDSIDQEDVEIDFSKVQIEDIYEDVDFDTFSKSDFRAVKVKDCVEVPKSKKLLQFTLDDGTGE
DRTILSGIKAYYNPEDLIGRTLLAIVNLPARKMMGVESQGMLLSAIHKEEGEEKLNLIILSNRIPAGAKLY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD66193.1 putative lysil-tRNA synthetase LysU Not tested PAI III 536 Protein 1e-110 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Apre_0628 YP_003152391.1 lysyl-tRNA synthetase VFG1668 Protein 7e-111 47